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The map label for this gene is yurM [H]

Identifier: 220932149

GI number: 220932149

Start: 1409933

End: 1410778

Strand: Reverse

Name: yurM [H]

Synonym: Hore_13120

Alternate gene names: 220932149

Gene position: 1410778-1409933 (Counterclockwise)

Preceding gene: 220932150

Following gene: 220932148

Centisome position: 54.72

GC content: 30.5

Gene sequence:

>846_bases
ATGAACACTAAAGCCTTTATTAATAAAAAGAAAATTAAACAGATAGTGATATATACAATTTTAATTATATTTGCAGTTGT
AAATTTATATCCTATTCTTTGGATGGCTATTAATTCTTGTAAAACTGAACAGGAGATAACCATGAATTCTTTTTCTTTTC
CTAACAGATTGTATTTAAACAATTACTTTGAAGCCTGGAAGACTGCTCACCTGGGAAACAGATTTATTAATAGTATTATT
GTTTCTATTGTTGCTATGGTTGTAACTGTTCTACTGGGAGCTCTTGTTTCTTATTTTATTGCCAGGTTTCAATTTAAGTG
GAAAAATATCTTATATGTAATCTTTATATTTGGAATGTTGGTTCCCATTCATGGTACATTGGTTCCTATGTTTATTTTAA
TGAGAAAAATAGGTTTAATAAACACTCGTTGGGCATTAATATTTCCTTATATAGGTTTTAATCTACCTTTAACAATCTTT
ATACTTGTAAGTTATATGAAAGGACTTCCAACCGAGGTTGAAGAGGCTGCTGTTGTAGATGGATGTGGGATTTTTAAGAT
TTTCTGGTCATTTATTTTACCGATGAGCAGACCTGCCCTGGCTACAGTAAGCATATTGAATTTTATTTTTAATTGGAATG
AATTTTCCTTTGCCCTGGTCTTAATTAATAGTGATTCTTTAAAAACTATACCTTTGGGTTTAGCAAGTTTTGCTGGAAAA
TACAGTACAAATTATGGGGTTCAAATGGCTGCCCTGACTATGGTTTTAATACCGATAATAATATTTTATTTAATAATGGA
AGAACATCTTATTAAGGGAATGAGTTCTGGGGCAGTTAAAGGATAA

Upstream 100 bases:

>100_bases
GTGCTGTGTCAGTATTTGTAGTCATTTTTGGACTTTTTCTAGTTATTACAATAAAAAAGCTATTTAACAGGAAAACTGTA
TAAATATGGAGGTGAAATTT

Downstream 100 bases:

>100_bases
GTTAAATAAGGTTATAAGATTAATAACATGGTGGAAGGAGTGATATTATTGATAATAAAAGATAACTGGAAGATAGCTTA
CTTTGATGTCAATGAAATAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNTKAFINKKKIKQIVIYTILIIFAVVNLYPILWMAINSCKTEQEITMNSFSFPNRLYLNNYFEAWKTAHLGNRFINSII
VSIVAMVVTVLLGALVSYFIARFQFKWKNILYVIFIFGMLVPIHGTLVPMFILMRKIGLINTRWALIFPYIGFNLPLTIF
ILVSYMKGLPTEVEEAAVVDGCGIFKIFWSFILPMSRPALATVSILNFIFNWNEFSFALVLINSDSLKTIPLGLASFAGK
YSTNYGVQMAALTMVLIPIIIFYLIMEEHLIKGMSSGAVKG

Sequences:

>Translated_281_residues
MNTKAFINKKKIKQIVIYTILIIFAVVNLYPILWMAINSCKTEQEITMNSFSFPNRLYLNNYFEAWKTAHLGNRFINSII
VSIVAMVVTVLLGALVSYFIARFQFKWKNILYVIFIFGMLVPIHGTLVPMFILMRKIGLINTRWALIFPYIGFNLPLTIF
ILVSYMKGLPTEVEEAAVVDGCGIFKIFWSFILPMSRPALATVSILNFIFNWNEFSFALVLINSDSLKTIPLGLASFAGK
YSTNYGVQMAALTMVLIPIIIFYLIMEEHLIKGMSSGAVKG
>Mature_281_residues
MNTKAFINKKKIKQIVIYTILIIFAVVNLYPILWMAINSCKTEQEITMNSFSFPNRLYLNNYFEAWKTAHLGNRFINSII
VSIVAMVVTVLLGALVSYFIARFQFKWKNILYVIFIFGMLVPIHGTLVPMFILMRKIGLINTRWALIFPYIGFNLPLTIF
ILVSYMKGLPTEVEEAAVVDGCGIFKIFWSFILPMSRPALATVSILNFIFNWNEFSFALVLINSDSLKTIPLGLASFAGK
YSTNYGVQMAALTMVLIPIIIFYLIMEEHLIKGMSSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=30.4964539007092, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=30.188679245283, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1789860, Length=282, Percent_Identity=21.6312056737589, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31906; Mature: 31906

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKAFINKKKIKQIVIYTILIIFAVVNLYPILWMAINSCKTEQEITMNSFSFPNRLYLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHH
NYFEAWKTAHLGNRFINSIIVSIVAMVVTVLLGALVSYFIARFQFKWKNILYVIFIFGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPIHGTLVPMFILMRKIGLINTRWALIFPYIGFNLPLTIFILVSYMKGLPTEVEEAAVVD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHC
GCGIFKIFWSFILPMSRPALATVSILNFIFNWNEFSFALVLINSDSLKTIPLGLASFAGK
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCC
YSTNYGVQMAALTMVLIPIIIFYLIMEEHLIKGMSSGAVKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTKAFINKKKIKQIVIYTILIIFAVVNLYPILWMAINSCKTEQEITMNSFSFPNRLYLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHH
NYFEAWKTAHLGNRFINSIIVSIVAMVVTVLLGALVSYFIARFQFKWKNILYVIFIFGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPIHGTLVPMFILMRKIGLINTRWALIFPYIGFNLPLTIFILVSYMKGLPTEVEEAAVVD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHC
GCGIFKIFWSFILPMSRPALATVSILNFIFNWNEFSFALVLINSDSLKTIPLGLASFAGK
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCC
YSTNYGVQMAALTMVLIPIIIFYLIMEEHLIKGMSSGAVKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]