| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932132
Identifier: 220932132
GI number: 220932132
Start: 1389443
End: 1390585
Strand: Reverse
Name: 220932132
Synonym: Hore_12950
Alternate gene names: NA
Gene position: 1390585-1389443 (Counterclockwise)
Preceding gene: 220932133
Following gene: 220932131
Centisome position: 53.94
GC content: 36.57
Gene sequence:
>1143_bases ATGGGGATGACATCACGGGAAAGAATTATGGCTGTTTTAAGGGGTAAGGAACCTGATAGAATTCCATGGTCTCCACTGGT AGGCCGTTATTATGTAAATTCTTTAGAAGAACAGGGGATTAAGCTTGAAGATATTGCTCCCCGGGAAATGGCAAAAACAC CGGCTTTGAAAAGAGATGTTAATCTTTATGAAGTTGAAGTGGTAAGGCATATTGGTGCTGATATCATGTACAGACATGTA AATTCTTATAAACTACATTATAAAAATTGTAAGCTCATAAATGAAACCAGAAATGGAGTAAGGTATGAAGGTTTTGAAAC CCCGGTTGGCAAAATATATTCAGAGCATAAAAAGAGTGGAGGAACGGAGTTTATCTCTAAACACCTGTTAGAAAATAAAA AAGATATAGAGGTTTTAACATATGTTTTTAGAAATGCAGTTGTAGAACCGGATTACCAGGATTTTTATGAATTTGATGAA CATATCGGAGATGATGGTATTGCCACCCTCACTGGCCCCTTGACTCCAATTCAGTTGATGCTTCAGTTTTATGTAGGTGT TGCCAACACAACCTATTTTTTAATGGATTATAAGGATGAGATGGAAAATTTATTTAGTGAAATTCATAATTTGAATAGAG ATATTTACAGGGTGATGGCAGAATCTCCTGCTGAAGTAATTATAACCTATGAAGATACCTCAACCACTGTTTTAAGTCCT GCCTGGTATGAACAGTATTGCAAAAAAGAGCTGGATGAGTATGCAGATATTATTCATGATTATAATAAAATATTTATTAC CCATATGTGTGGTAAGTTATCACTACTGACAGATACACTGGCTGAAGGAAAGATGGATGGTATCGATTCTGTATGTCCTC CAACCACCGGAGATCTGGAACCCGGTGATGCCCTTGAAGAGACAGGGAAAATAATTATAGGTGGACTTGAACCTGCTGCC CTGGTTAGAATGAATGTTGAAGAGACGAGGGAATATACTCTGGAAAAGTTAAAACAGGTAGGAACCGGCCGTAATTTTAT TTTATCAACCGGTGATTCTACTGCTTATGGAACACCCTTAGAAAATTTAAAAGCCATTACCAGGGTAATAAAAGAATATG GACAATTTCCATTAAATTTATAA
Upstream 100 bases:
>100_bases AATTATTACAATTATCAAATCATTATTTATTATATAATAAAACTAACGGACATAAAATTTACCCACAGAATGTTCGCGCG AAAACAAGGAGGTATTTAAA
Downstream 100 bases:
>100_bases TTAACTCTAAAAGTCTTTTATATAATATATATAAATTAACATACTATAAGAATTCACATAAGGTAAAAGTTTAATCAGTA AGATAAACCCTTCCCCTTCC
Product: Uroporphyrinogen-III decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MGMTSRERIMAVLRGKEPDRIPWSPLVGRYYVNSLEEQGIKLEDIAPREMAKTPALKRDVNLYEVEVVRHIGADIMYRHV NSYKLHYKNCKLINETRNGVRYEGFETPVGKIYSEHKKSGGTEFISKHLLENKKDIEVLTYVFRNAVVEPDYQDFYEFDE HIGDDGIATLTGPLTPIQLMLQFYVGVANTTYFLMDYKDEMENLFSEIHNLNRDIYRVMAESPAEVIITYEDTSTTVLSP AWYEQYCKKELDEYADIIHDYNKIFITHMCGKLSLLTDTLAEGKMDGIDSVCPPTTGDLEPGDALEETGKIIIGGLEPAA LVRMNVEETREYTLEKLKQVGTGRNFILSTGDSTAYGTPLENLKAITRVIKEYGQFPLNL
Sequences:
>Translated_380_residues MGMTSRERIMAVLRGKEPDRIPWSPLVGRYYVNSLEEQGIKLEDIAPREMAKTPALKRDVNLYEVEVVRHIGADIMYRHV NSYKLHYKNCKLINETRNGVRYEGFETPVGKIYSEHKKSGGTEFISKHLLENKKDIEVLTYVFRNAVVEPDYQDFYEFDE HIGDDGIATLTGPLTPIQLMLQFYVGVANTTYFLMDYKDEMENLFSEIHNLNRDIYRVMAESPAEVIITYEDTSTTVLSP AWYEQYCKKELDEYADIIHDYNKIFITHMCGKLSLLTDTLAEGKMDGIDSVCPPTTGDLEPGDALEETGKIIIGGLEPAA LVRMNVEETREYTLEKLKQVGTGRNFILSTGDSTAYGTPLENLKAITRVIKEYGQFPLNL >Mature_379_residues GMTSRERIMAVLRGKEPDRIPWSPLVGRYYVNSLEEQGIKLEDIAPREMAKTPALKRDVNLYEVEVVRHIGADIMYRHVN SYKLHYKNCKLINETRNGVRYEGFETPVGKIYSEHKKSGGTEFISKHLLENKKDIEVLTYVFRNAVVEPDYQDFYEFDEH IGDDGIATLTGPLTPIQLMLQFYVGVANTTYFLMDYKDEMENLFSEIHNLNRDIYRVMAESPAEVIITYEDTSTTVLSPA WYEQYCKKELDEYADIIHDYNKIFITHMCGKLSLLTDTLAEGKMDGIDSVCPPTTGDLEPGDALEETGKIIIGGLEPAAL VRMNVEETREYTLEKLKQVGTGRNFILSTGDSTAYGTPLENLKAITRVIKEYGQFPLNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43378; Mature: 43247
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMTSRERIMAVLRGKEPDRIPWSPLVGRYYVNSLEEQGIKLEDIAPREMAKTPALKRDV CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHCCCHHHCC NLYEVEVVRHIGADIMYRHVNSYKLHYKNCKLINETRNGVRYEGFETPVGKIYSEHKKSG CHHHHHHHHHHCHHHHHHHHCCEEEEECCCEEEHHHCCCCEECCCCCCHHHHHHHHHCCC GTEFISKHLLENKKDIEVLTYVFRNAVVEPDYQDFYEFDEHIGDDGIATLTGPLTPIQLM CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEECCCCCHHHHHH LQFYVGVANTTYFLMDYKDEMENLFSEIHNLNRDIYRVMAESPAEVIITYEDTSTTVLSP HHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECC AWYEQYCKKELDEYADIIHDYNKIFITHMCGKLSLLTDTLAEGKMDGIDSVCPPTTGDLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PGDALEETGKIIIGGLEPAALVRMNVEETREYTLEKLKQVGTGRNFILSTGDSTAYGTPL CCHHHHHCCCEEEECCCCHHHEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH ENLKAITRVIKEYGQFPLNL HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GMTSRERIMAVLRGKEPDRIPWSPLVGRYYVNSLEEQGIKLEDIAPREMAKTPALKRDV CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHCCCHHHCC NLYEVEVVRHIGADIMYRHVNSYKLHYKNCKLINETRNGVRYEGFETPVGKIYSEHKKSG CHHHHHHHHHHCHHHHHHHHCCEEEEECCCEEEHHHCCCCEECCCCCCHHHHHHHHHCCC GTEFISKHLLENKKDIEVLTYVFRNAVVEPDYQDFYEFDEHIGDDGIATLTGPLTPIQLM CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEECCCCCHHHHHH LQFYVGVANTTYFLMDYKDEMENLFSEIHNLNRDIYRVMAESPAEVIITYEDTSTTVLSP HHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECC AWYEQYCKKELDEYADIIHDYNKIFITHMCGKLSLLTDTLAEGKMDGIDSVCPPTTGDLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PGDALEETGKIIIGGLEPAALVRMNVEETREYTLEKLKQVGTGRNFILSTGDSTAYGTPL CCHHHHHCCCEEEECCCCHHHEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH ENLKAITRVIKEYGQFPLNL HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA