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The map label for this gene is ydeD [C]

Identifier: 220932131

GI number: 220932131

Start: 1388224

End: 1389159

Strand: Reverse

Name: ydeD [C]

Synonym: Hore_12940

Alternate gene names: 220932131

Gene position: 1389159-1388224 (Counterclockwise)

Preceding gene: 220932132

Following gene: 220932130

Centisome position: 53.88

GC content: 32.16

Gene sequence:

>936_bases
ATGAGAGAAGAAAATATATTTACCGGAAAATATTCTGTACCATTTCTGGCCACACTGGCCTGTATATTGTGGGGAACTGC
TTTTCCTTTCCTTAAAATAAGCTATCAGGAACTGGGAATTGGAAAAAATGACTATCTTTTAAAAATCCTGTTTGCTTCAT
ATAGATTCTTGATGGCAGCAGTGATTCTTTTGATCTGGAGGGTTATAAAAACCCGGAAGAGTATCAGTCATGACATAACT
ACCCTGGGGAAAAAAAGTATTATTAAGTTGCTTTTACTGGGATTTATCCAGACTACTCTACAGTATTTCTTTTTTTATAA
TGGTCTTGCCAATACAACCGGTGTTAAGGCTTCAATTTTGAATACACTGGGGATTTTTTTAACAGTTGTATTATCACATT
TTATATTTTATTATGATAAATTAAATTTACAGAAATCCCTGGGGTTAGTATTGGGATTTTCAGGAGTAGTTTTAGTAAAC
CTTTCTAGAGGGGAGTTTAGTTTTTCTTTTAATTTTTTAGGTGAAGGGTTTATTATTATGGCAGCCATTACTTCTGCTCT
ATCTAATTTATTGGTTAAAAAGATTTCATTGAAGATAGAACCCACAATAATTACTGCTTATCAAATGCTGATGGGGGCCT
TGATTTTATTTTTAATTGCTGTAACAGGGGTCAGTCCTTTAAGTCTTAACATGTCTCTCAAAGCTTTATTAATATTAATT
TATTTATCATTTGTATCAGCAGCTGGTTTTGGCCTGTGGTATTCACTAATTAAATATAATAAACTCGGTTATATTTCTAT
CTATAGATTTGTAATTCCGGTAAGTGGTGTCTTTTTTTCTACCCTGCTATTAAATGAAGGTATAACCGGGTATATTTTTA
CTGCTCTTGTTTTTGTTTCGACAGGGATAGTTTTAATAAATTATAAACGGACATAA

Upstream 100 bases:

>100_bases
TTGCCAATATTTTTGTATAATTAGATGGTGGACTATTTGTTTGATTTATATAAAAAAATTTATGGTTGATTAAAAAGTCA
GGAAATTAAGGATGGTTTAA

Downstream 100 bases:

>100_bases
ATATGATTTTTAAAAAAGAACATTGTTGTTTTGATAACCCTATTCTATTCAGAATAGGGTTTTTTTGTATTTTTAAATCT
AAAAATATAAAAAAATTACT

Product: membrane protein

Products: NA

Alternate protein names: Exported Membrane Protein; Integral Membrane Protein; Integral Membrane; Drug/Metabolite Exporter Family Transporter; Transporter EamA Family

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MREENIFTGKYSVPFLATLACILWGTAFPFLKISYQELGIGKNDYLLKILFASYRFLMAAVILLIWRVIKTRKSISHDIT
TLGKKSIIKLLLLGFIQTTLQYFFFYNGLANTTGVKASILNTLGIFLTVVLSHFIFYYDKLNLQKSLGLVLGFSGVVLVN
LSRGEFSFSFNFLGEGFIIMAAITSALSNLLVKKISLKIEPTIITAYQMLMGALILFLIAVTGVSPLSLNMSLKALLILI
YLSFVSAAGFGLWYSLIKYNKLGYISIYRFVIPVSGVFFSTLLLNEGITGYIFTALVFVSTGIVLINYKRT

Sequences:

>Translated_311_residues
MREENIFTGKYSVPFLATLACILWGTAFPFLKISYQELGIGKNDYLLKILFASYRFLMAAVILLIWRVIKTRKSISHDIT
TLGKKSIIKLLLLGFIQTTLQYFFFYNGLANTTGVKASILNTLGIFLTVVLSHFIFYYDKLNLQKSLGLVLGFSGVVLVN
LSRGEFSFSFNFLGEGFIIMAAITSALSNLLVKKISLKIEPTIITAYQMLMGALILFLIAVTGVSPLSLNMSLKALLILI
YLSFVSAAGFGLWYSLIKYNKLGYISIYRFVIPVSGVFFSTLLLNEGITGYIFTALVFVSTGIVLINYKRT
>Mature_311_residues
MREENIFTGKYSVPFLATLACILWGTAFPFLKISYQELGIGKNDYLLKILFASYRFLMAAVILLIWRVIKTRKSISHDIT
TLGKKSIIKLLLLGFIQTTLQYFFFYNGLANTTGVKASILNTLGIFLTVVLSHFIFYYDKLNLQKSLGLVLGFSGVVLVN
LSRGEFSFSFNFLGEGFIIMAAITSALSNLLVKKISLKIEPTIITAYQMLMGALILFLIAVTGVSPLSLNMSLKALLILI
YLSFVSAAGFGLWYSLIKYNKLGYISIYRFVIPVSGVFFSTLLLNEGITGYIFTALVFVSTGIVLINYKRT

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34690; Mature: 34690

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREENIFTGKYSVPFLATLACILWGTAFPFLKISYQELGIGKNDYLLKILFASYRFLMAA
CCCCCEEECCCCCHHHHHHHHHHHHHHCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHH
VILLIWRVIKTRKSISHDITTLGKKSIIKLLLLGFIQTTLQYFFFYNGLANTTGVKASIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
NTLGIFLTVVLSHFIFYYDKLNLQKSLGLVLGFSGVVLVNLSRGEFSFSFNFLGEGFIIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCEEEEEEECCCCHHHH
AAITSALSNLLVKKISLKIEPTIITAYQMLMGALILFLIAVTGVSPLSLNMSLKALLILI
HHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHH
YLSFVSAAGFGLWYSLIKYNKLGYISIYRFVIPVSGVFFSTLLLNEGITGYIFTALVFVS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TGIVLINYKRT
CCEEEEEEECC
>Mature Secondary Structure
MREENIFTGKYSVPFLATLACILWGTAFPFLKISYQELGIGKNDYLLKILFASYRFLMAA
CCCCCEEECCCCCHHHHHHHHHHHHHHCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHH
VILLIWRVIKTRKSISHDITTLGKKSIIKLLLLGFIQTTLQYFFFYNGLANTTGVKASIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
NTLGIFLTVVLSHFIFYYDKLNLQKSLGLVLGFSGVVLVNLSRGEFSFSFNFLGEGFIIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCEEEEEEECCCCHHHH
AAITSALSNLLVKKISLKIEPTIITAYQMLMGALILFLIAVTGVSPLSLNMSLKALLILI
HHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHH
YLSFVSAAGFGLWYSLIKYNKLGYISIYRFVIPVSGVFFSTLLLNEGITGYIFTALVFVS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TGIVLINYKRT
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA