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The map label for this gene is yerB [H]

Identifier: 220932090

GI number: 220932090

Start: 1346286

End: 1347335

Strand: Reverse

Name: yerB [H]

Synonym: Hore_12530

Alternate gene names: 220932090

Gene position: 1347335-1346286 (Counterclockwise)

Preceding gene: 220932091

Following gene: 220932089

Centisome position: 52.26

GC content: 38.86

Gene sequence:

>1050_bases
ATGGATCCCGGTAAGGTCGGGGATCTGAGTTTGAATGGAATTGGTTTAAATAAAGGCCTTGATAAAACAGGGGAAGATAC
AAATGTTAACTTTCCTGATAAAAAAAACACCAAATCAAATAAAAATCTGATTGAGGAAAATAACGATGACATTGCGGTAT
ATCCAGAGTATTTTTCACCATTTACCGGGGAACCGATATTAAAACCATCCCTTGAAAGAACTATTATGACCTGTATAGAT
AATTCAGCTGCTGCCAGGCCTCAGGCGGGCCTGGATGAGGCTCTGATTGTTTATGAAATGTTGGTTGAGGGTGGTGTTAC
CAGGTTTTTAGCCCTCTACTGGCAGGATATACCTGATCAGATTGGTCCCATCCGAAGTGTTAGACCATATATGATCAAAA
TTGCCTCTGAATATAATGCTTTATTATTACACGCCGGGGCCAGTCCCCGGGGATTTGCTCTGCTGGAAAAGAGTCATGTT
GACCATCTTGATCAGATATTCAAAGGAAGTTATTACTGGCGAACCAGTGATAGAGAGGCTCCCCATAATTTATATACCGG
AGGATTTAAGATTAAAGATTATTTAAAGAATTTAACCGGTCAGGAATATGATGAACGTTTTAAGTTTAATAAAGTAAGTT
TTGTAAGCTCGGGTGATATAAGGGCTGGTAAAATATATATATATTTCTGGGGCGGCTACAAGGTTTTGTATAAATACAAT
TCCAGAGAAAATCTCTACTACAGATATATTAATGATTTTAATACCCCCCACCGGAACGAAGATGATAAACACTTAACTGC
CCGTAATATTATTATTCAGTATGTTCCTACCAGTGTTATTGATGATGTGGGAAGGCTTGAAATGGACTTAACCGGAGCCG
GTGATGCCCTTATTTTCAAAAACGGTATTGTTATCGAGGGGTTGTGGAAAAATCTTAATGGGTCCAGGACCGATTTTTAT
AATAACAATGGTGAACAAGTATCCTTTAACCCCGGTCAAACCTGGATAATAATAGTACCGGAGACCACCTATGTAGATTA
TGAGGAGTGA

Upstream 100 bases:

>100_bases
ACAAAGTCAGGAAATATCTAAAGAGAATAAACAGCAGGTTACAAATCCAGATGGAGGTAACCTTTCAGAAAGCCAGACCG
GTACTAGTTCTGATGAGTCC

Downstream 100 bases:

>100_bases
TTAAATTTGGATAAAACAATTAAAACATTAATTAAGAAAGCAAGAGAAGCCCGGGAAAAATCCTATAGTCCCTATTCTAA
TTTTGCAACCGGTGCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MDPGKVGDLSLNGIGLNKGLDKTGEDTNVNFPDKKNTKSNKNLIEENNDDIAVYPEYFSPFTGEPILKPSLERTIMTCID
NSAAARPQAGLDEALIVYEMLVEGGVTRFLALYWQDIPDQIGPIRSVRPYMIKIASEYNALLLHAGASPRGFALLEKSHV
DHLDQIFKGSYYWRTSDREAPHNLYTGGFKIKDYLKNLTGQEYDERFKFNKVSFVSSGDIRAGKIYIYFWGGYKVLYKYN
SRENLYYRYINDFNTPHRNEDDKHLTARNIIIQYVPTSVIDDVGRLEMDLTGAGDALIFKNGIVIEGLWKNLNGSRTDFY
NNNGEQVSFNPGQTWIIIVPETTYVDYEE

Sequences:

>Translated_349_residues
MDPGKVGDLSLNGIGLNKGLDKTGEDTNVNFPDKKNTKSNKNLIEENNDDIAVYPEYFSPFTGEPILKPSLERTIMTCID
NSAAARPQAGLDEALIVYEMLVEGGVTRFLALYWQDIPDQIGPIRSVRPYMIKIASEYNALLLHAGASPRGFALLEKSHV
DHLDQIFKGSYYWRTSDREAPHNLYTGGFKIKDYLKNLTGQEYDERFKFNKVSFVSSGDIRAGKIYIYFWGGYKVLYKYN
SRENLYYRYINDFNTPHRNEDDKHLTARNIIIQYVPTSVIDDVGRLEMDLTGAGDALIFKNGIVIEGLWKNLNGSRTDFY
NNNGEQVSFNPGQTWIIIVPETTYVDYEE
>Mature_349_residues
MDPGKVGDLSLNGIGLNKGLDKTGEDTNVNFPDKKNTKSNKNLIEENNDDIAVYPEYFSPFTGEPILKPSLERTIMTCID
NSAAARPQAGLDEALIVYEMLVEGGVTRFLALYWQDIPDQIGPIRSVRPYMIKIASEYNALLLHAGASPRGFALLEKSHV
DHLDQIFKGSYYWRTSDREAPHNLYTGGFKIKDYLKNLTGQEYDERFKFNKVSFVSSGDIRAGKIYIYFWGGYKVLYKYN
SRENLYYRYINDFNTPHRNEDDKHLTARNIIIQYVPTSVIDDVGRLEMDLTGAGDALIFKNGIVIEGLWKNLNGSRTDFY
NNNGEQVSFNPGQTWIIIVPETTYVDYEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021416
- InterPro:   IPR023158 [H]

Pfam domain/function: PF11258 DUF3048 [H]

EC number: NA

Molecular weight: Translated: 39788; Mature: 39788

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPGKVGDLSLNGIGLNKGLDKTGEDTNVNFPDKKNTKSNKNLIEENNDDIAVYPEYFSP
CCCCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHCCC
FTGEPILKPSLERTIMTCIDNSAAARPQAGLDEALIVYEMLVEGGVTRFLALYWQDIPDQ
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
IGPIRSVRPYMIKIASEYNALLLHAGASPRGFALLEKSHVDHLDQIFKGSYYWRTSDREA
HCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCC
PHNLYTGGFKIKDYLKNLTGQEYDERFKFNKVSFVSSGDIRAGKIYIYFWGGYKVLYKYN
CCCEEECCEEHHHHHHHCCCCCHHHHHCCCEEEEEECCCEEEEEEEEEEECCEEEEEEEC
SRENLYYRYINDFNTPHRNEDDKHLTARNIIIQYVPTSVIDDVGRLEMDLTGAGDALIFK
CCCCEEEEEECCCCCCCCCCCCCEEHEHEEEEEECCHHHHHCCCCEEEEECCCCCEEEEE
NGIVIEGLWKNLNGSRTDFYNNNGEQVSFNPGQTWIIIVPETTYVDYEE
CCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEECCCC
>Mature Secondary Structure
MDPGKVGDLSLNGIGLNKGLDKTGEDTNVNFPDKKNTKSNKNLIEENNDDIAVYPEYFSP
CCCCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECHHCCC
FTGEPILKPSLERTIMTCIDNSAAARPQAGLDEALIVYEMLVEGGVTRFLALYWQDIPDQ
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHH
IGPIRSVRPYMIKIASEYNALLLHAGASPRGFALLEKSHVDHLDQIFKGSYYWRTSDREA
HCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCC
PHNLYTGGFKIKDYLKNLTGQEYDERFKFNKVSFVSSGDIRAGKIYIYFWGGYKVLYKYN
CCCEEECCEEHHHHHHHCCCCCHHHHHCCCEEEEEECCCEEEEEEEEEEECCEEEEEEEC
SRENLYYRYINDFNTPHRNEDDKHLTARNIIIQYVPTSVIDDVGRLEMDLTGAGDALIFK
CCCCEEEEEECCCCCCCCCCCCCEEHEHEEEEEECCHHHHHCCCCEEEEECCCCCEEEEE
NGIVIEGLWKNLNGSRTDFYNNNGEQVSFNPGQTWIIIVPETTYVDYEE
CCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]