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The map label for this gene is 220932084

Identifier: 220932084

GI number: 220932084

Start: 1341693

End: 1342067

Strand: Reverse

Name: 220932084

Synonym: Hore_12470

Alternate gene names: NA

Gene position: 1342067-1341693 (Counterclockwise)

Preceding gene: 220932085

Following gene: 220932082

Centisome position: 52.06

GC content: 37.07

Gene sequence:

>375_bases
ATGGATAAATTAGAAAAGATTGATATGATCCGGCAACGACTCAATGTTAGCTATGAAAAAGCCAATCAGGCCCTTGAGGA
AGCCGGCGGGGATGTTGTGGAGGCCTTAATTAAACTTGAAAAAGAAATGGGTAAAAATGGTGAGAACGTAGTCCATGTTA
AAGGTCAGGAATTAATCAATAAAATTAAAGAAATTATTAAAGAAGGTAATGCGAAAAAAATTGTTGTCAAAGATAATGAA
AAAACCCTTGTTGAAATTCCGGTTACAGCAGGGATTGTTGGGCTAGTATTATTCCCGTATATATCTATTCTGGCCGGTCT
GGCTGCCATGTATAAGGATTATACCCTGGAAATCGATAAAGAGGACCAGAATTAA

Upstream 100 bases:

>100_bases
TTGATTCTTTTATTACTTATCATTTAGATCTTAGATTTAAATCCCTTGATTTTTTGCATATGATTAGAGATTTGGGTTAA
ACTTATTATGAGGTGATTTT

Downstream 100 bases:

>100_bases
TGGTAGAATTAGGCCTCGTCCCTGTTCCAGTGGGATGAGGTTTTTGCATTTTTCATGGGAGTTCTATTATATTAAAACTA
CTTAATATATGATTAATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Ubiquitin-Associated Domain-Containing Protein; Ubiquitin-Associated-Domain-Containing Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MDKLEKIDMIRQRLNVSYEKANQALEEAGGDVVEALIKLEKEMGKNGENVVHVKGQELINKIKEIIKEGNAKKIVVKDNE
KTLVEIPVTAGIVGLVLFPYISILAGLAAMYKDYTLEIDKEDQN

Sequences:

>Translated_124_residues
MDKLEKIDMIRQRLNVSYEKANQALEEAGGDVVEALIKLEKEMGKNGENVVHVKGQELINKIKEIIKEGNAKKIVVKDNE
KTLVEIPVTAGIVGLVLFPYISILAGLAAMYKDYTLEIDKEDQN
>Mature_124_residues
MDKLEKIDMIRQRLNVSYEKANQALEEAGGDVVEALIKLEKEMGKNGENVVHVKGQELINKIKEIIKEGNAKKIVVKDNE
KTLVEIPVTAGIVGLVLFPYISILAGLAAMYKDYTLEIDKEDQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13854; Mature: 13854

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLEKIDMIRQRLNVSYEKANQALEEAGGDVVEALIKLEKEMGKNGENVVHVKGQELIN
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHH
KIKEIIKEGNAKKIVVKDNEKTLVEIPVTAGIVGLVLFPYISILAGLAAMYKDYTLEIDK
HHHHHHHCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
EDQN
CCCC
>Mature Secondary Structure
MDKLEKIDMIRQRLNVSYEKANQALEEAGGDVVEALIKLEKEMGKNGENVVHVKGQELIN
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHH
KIKEIIKEGNAKKIVVKDNEKTLVEIPVTAGIVGLVLFPYISILAGLAAMYKDYTLEIDK
HHHHHHHCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
EDQN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA