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The map label for this gene is glyQ [H]

Identifier: 220932082

GI number: 220932082

Start: 1340609

End: 1341457

Strand: Reverse

Name: glyQ [H]

Synonym: Hore_12450

Alternate gene names: 220932082

Gene position: 1341457-1340609 (Counterclockwise)

Preceding gene: 220932084

Following gene: 220932081

Centisome position: 52.03

GC content: 41.22

Gene sequence:

>849_bases
ATGAATTTCCAGGATTTAATACAGGTTTTAAATAAGTACTGGGGAGATCTAGGTTGCATTATTGAACAACCTTATGATAT
AGAGGTCGGGGCTGCTACAATGAGTCCTTCTACTTTTTTAAGGTCACTGGGACCCGATAGCTGGAATACAGCATATGTAC
AGCCCTGTCGCCGTCCTACTGATGGGAGGTATGGAGATAATCCCTTCAGGTTACAGAGGTATTTTCAGTACCAGGTAATA
ATGAAACCTTCCCCTGATAATATACAGGAGCTATATCTTAACAGCTTAAAAGCCCTCGGAATTGACCCTTTAAAACATGA
CATACGTTTTGTGGAAGATAACTGGGAATCACCAACTTTAGGAGCCTGGGGTATTGGCTGGGAAGTCTGGCTCGACGGTA
TGGAAATAACCCAGTTTACTTATTTTCAACAGGTAGGTGGATTTGAGGCCAGGCCGGTTACTGTAGAGATAACCTATGGT
CTGGAAAGGCTGGCCATGTATCTCCAGGATAAGGACAGTATTTTTGATGTGGTCTGGGTTGATGACATCACTTACAGGGA
TATATACCACCAGAATGAGGTTGAACAGTCAAGGTATAATTTTGAGGTTGCTGATGTAAAGAAACTATTAAATTTGTTTA
ACATGTATGAAGAAGAGGCCCGGCAGCTGGTAGAGGATGGGTTAACATTACCGGCCTTTGATTATACATTGAAGTGTTCC
CATACCTTTAATTTACTCGATGCTAGAGGGGCAATAAGTGTTAGTGAAAGAACACGATATATAGGTCGAGTTCGTGAACT
TGCTCATCTCTGTGCTGAAAGCTATTTATCTTCTTTGAAGGATAAATAA

Upstream 100 bases:

>100_bases
ACTGTGGTTTTATTTTTGTTATAACTTTTAATCCTGTATTTTCTATACATATATATAACACATAATATTAATATATTTTA
AGAAAGGATGGGAGATAACG

Downstream 100 bases:

>100_bases
AGTTATTTATCTTCATTGGGTAAATGGTTCAGTATATATCGGGAATAACGGGTACAGGTATATATTTTAGTATACAGGTA
TAAAAAATTTAAAATAAATC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNFQDLIQVLNKYWGDLGCIIEQPYDIEVGAATMSPSTFLRSLGPDSWNTAYVQPCRRPTDGRYGDNPFRLQRYFQYQVI
MKPSPDNIQELYLNSLKALGIDPLKHDIRFVEDNWESPTLGAWGIGWEVWLDGMEITQFTYFQQVGGFEARPVTVEITYG
LERLAMYLQDKDSIFDVVWVDDITYRDIYHQNEVEQSRYNFEVADVKKLLNLFNMYEEEARQLVEDGLTLPAFDYTLKCS
HTFNLLDARGAISVSERTRYIGRVRELAHLCAESYLSSLKDK

Sequences:

>Translated_282_residues
MNFQDLIQVLNKYWGDLGCIIEQPYDIEVGAATMSPSTFLRSLGPDSWNTAYVQPCRRPTDGRYGDNPFRLQRYFQYQVI
MKPSPDNIQELYLNSLKALGIDPLKHDIRFVEDNWESPTLGAWGIGWEVWLDGMEITQFTYFQQVGGFEARPVTVEITYG
LERLAMYLQDKDSIFDVVWVDDITYRDIYHQNEVEQSRYNFEVADVKKLLNLFNMYEEEARQLVEDGLTLPAFDYTLKCS
HTFNLLDARGAISVSERTRYIGRVRELAHLCAESYLSSLKDK
>Mature_282_residues
MNFQDLIQVLNKYWGDLGCIIEQPYDIEVGAATMSPSTFLRSLGPDSWNTAYVQPCRRPTDGRYGDNPFRLQRYFQYQVI
MKPSPDNIQELYLNSLKALGIDPLKHDIRFVEDNWESPTLGAWGIGWEVWLDGMEITQFTYFQQVGGFEARPVTVEITYG
LERLAMYLQDKDSIFDVVWVDDITYRDIYHQNEVEQSRYNFEVADVKKLLNLFNMYEEEARQLVEDGLTLPAFDYTLKCS
HTFNLLDARGAISVSERTRYIGRVRELAHLCAESYLSSLKDK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=283, Percent_Identity=65.3710247349823, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 32828; Mature: 32828

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQDLIQVLNKYWGDLGCIIEQPYDIEVGAATMSPSTFLRSLGPDSWNTAYVQPCRRPT
CCHHHHHHHHHHHHCCEEHEECCCCCEEECCCCCCHHHHHHHCCCCCCCCHHHCCCCCCC
DGRYGDNPFRLQRYFQYQVIMKPSPDNIQELYLNSLKALGIDPLKHDIRFVEDNWESPTL
CCCCCCCHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCC
GAWGIGWEVWLDGMEITQFTYFQQVGGFEARPVTVEITYGLERLAMYLQDKDSIFDVVWV
CCCCCCHHHEECCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEE
DDITYRDIYHQNEVEQSRYNFEVADVKKLLNLFNMYEEEARQLVEDGLTLPAFDYTLKCS
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
HTFNLLDARGAISVSERTRYIGRVRELAHLCAESYLSSLKDK
CEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFQDLIQVLNKYWGDLGCIIEQPYDIEVGAATMSPSTFLRSLGPDSWNTAYVQPCRRPT
CCHHHHHHHHHHHHCCEEHEECCCCCEEECCCCCCHHHHHHHCCCCCCCCHHHCCCCCCC
DGRYGDNPFRLQRYFQYQVIMKPSPDNIQELYLNSLKALGIDPLKHDIRFVEDNWESPTL
CCCCCCCHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCCCC
GAWGIGWEVWLDGMEITQFTYFQQVGGFEARPVTVEITYGLERLAMYLQDKDSIFDVVWV
CCCCCCHHHEECCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEE
DDITYRDIYHQNEVEQSRYNFEVADVKKLLNLFNMYEEEARQLVEDGLTLPAFDYTLKCS
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
HTFNLLDARGAISVSERTRYIGRVRELAHLCAESYLSSLKDK
CEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA