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The map label for this gene is ytqA [H]

Identifier: 220932036

GI number: 220932036

Start: 1293666

End: 1294622

Strand: Reverse

Name: ytqA [H]

Synonym: Hore_11990

Alternate gene names: 220932036

Gene position: 1294622-1293666 (Counterclockwise)

Preceding gene: 220932037

Following gene: 220932035

Centisome position: 50.22

GC content: 32.5

Gene sequence:

>957_bases
ATGGACATATATTATCGTTACTCAAAATATTTAAAGGAAAAGTATGGAGTTAAAACATATAAATTACCAGTTAATATACC
GGTTAGCTGTCCCAATCGTGATGGTTTTTTAAGTGAGGGTGGGTGTTCATTTTGTGGTGAAATGGGAGCAGGGTTTGAAA
ATTATCCCGCTTCTATGTCAGTTAAAGAACAATTAGAAAAGAATAAAACATATATTGGTAATAAATATGGTGCTGAGAAG
TTTATTGCCTATTTTCAGAATTTCTCAAACACATATTTACCTGTTGAAAAATTGCTTAAATACCTTGAAGAAGCTACAGA
AGTTAATGATATTGCTGCCATAATTTTGTCTACCAGACCTGATTGTATCAACAATGTCTATTTAAAAAAAATAAAAGAGA
AAATGGAAAAAAAAGTCCCTGAAATTAATCTGGGGCTTGAACTGGGATTACAGACTGTAAATTATCATACCCTGACCAGG
GTAAACAGGGGACATACACTTGGAGAGGTTATTGATGCAATTTTAAATGCCCAAAAATATAATTTTGAGATAGGGATTCA
CCTCATTCTTAACTTGCCTGGTGATAACATGGTAGATGTAATTGAAAATGCTAAAATAATTTCAGCTTTAAAGGTGGATA
ATGTAAAGCTACATGCATTATATATCAGGGAAGGAACTGAATTTGCTGAAAAATATAAAAAAGGTGAGTTTGATATAATA
CCTCTTGAAGAATATGTTGAGAGGGTTATAACTTTTTTAGAATACCTTGACCCTCAAATAGCTATTCAGAGATTACTCGG
GAGAGCACCTGAAGAAAAGACATTGTTTGCAAACTGGGATAAAAGCTGGTGGAAAATATACAATATCATCATTGAAGAAA
TGAAGAAGAGAAAAACTTATCAGGGAAAGAAGTTTGAATACCTTCAGGGGAAGGCTTTAAAGAAATTCATCAAATAA

Upstream 100 bases:

>100_bases
GACACATACGAGGAGATGACTTCCAGTAAAATCAATTATTATAAAATATAAATTATAAAGTGAAACTTTTTATTAAGTTT
GTTTTTCAGGGGGTTTTTTT

Downstream 100 bases:

>100_bases
AAAATGGGGTTAAATAAAAAAAAATGGAGCTGACGACCGGACTTGAACCGGTAGCCTGCTGATTACAAGTCAGCTGCTCT
ACCAATTGAGCTACGTCAGC

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDIYYRYSKYLKEKYGVKTYKLPVNIPVSCPNRDGFLSEGGCSFCGEMGAGFENYPASMSVKEQLEKNKTYIGNKYGAEK
FIAYFQNFSNTYLPVEKLLKYLEEATEVNDIAAIILSTRPDCINNVYLKKIKEKMEKKVPEINLGLELGLQTVNYHTLTR
VNRGHTLGEVIDAILNAQKYNFEIGIHLILNLPGDNMVDVIENAKIISALKVDNVKLHALYIREGTEFAEKYKKGEFDII
PLEEYVERVITFLEYLDPQIAIQRLLGRAPEEKTLFANWDKSWWKIYNIIIEEMKKRKTYQGKKFEYLQGKALKKFIK

Sequences:

>Translated_318_residues
MDIYYRYSKYLKEKYGVKTYKLPVNIPVSCPNRDGFLSEGGCSFCGEMGAGFENYPASMSVKEQLEKNKTYIGNKYGAEK
FIAYFQNFSNTYLPVEKLLKYLEEATEVNDIAAIILSTRPDCINNVYLKKIKEKMEKKVPEINLGLELGLQTVNYHTLTR
VNRGHTLGEVIDAILNAQKYNFEIGIHLILNLPGDNMVDVIENAKIISALKVDNVKLHALYIREGTEFAEKYKKGEFDII
PLEEYVERVITFLEYLDPQIAIQRLLGRAPEEKTLFANWDKSWWKIYNIIIEEMKKRKTYQGKKFEYLQGKALKKFIK
>Mature_318_residues
MDIYYRYSKYLKEKYGVKTYKLPVNIPVSCPNRDGFLSEGGCSFCGEMGAGFENYPASMSVKEQLEKNKTYIGNKYGAEK
FIAYFQNFSNTYLPVEKLLKYLEEATEVNDIAAIILSTRPDCINNVYLKKIKEKMEKKVPEINLGLELGLQTVNYHTLTR
VNRGHTLGEVIDAILNAQKYNFEIGIHLILNLPGDNMVDVIENAKIISALKVDNVKLHALYIREGTEFAEKYKKGEFDII
PLEEYVERVITFLEYLDPQIAIQRLLGRAPEEKTLFANWDKSWWKIYNIIIEEMKKRKTYQGKKFEYLQGKALKKFIK

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=274, Percent_Identity=29.1970802919708, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36900; Mature: 36900

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIYYRYSKYLKEKYGVKTYKLPVNIPVSCPNRDGFLSEGGCSFCGEMGAGFENYPASMS
CCCHHHHHHHHHHHHCCEEEEEEEECEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCH
VKEQLEKNKTYIGNKYGAEKFIAYFQNFSNTYLPVEKLLKYLEEATEVNDIAAIILSTRP
HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DCINNVYLKKIKEKMEKKVPEINLGLELGLQTVNYHTLTRVNRGHTLGEVIDAILNAQKY
HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHCCHHC
NFEIGIHLILNLPGDNMVDVIENAKIISALKVDNVKLHALYIREGTEFAEKYKKGEFDII
EEEEEEEEEEECCCCCHHHHHHCCHHHHHEEECCEEEEEEEEECCHHHHHHHCCCCCEEE
PLEEYVERVITFLEYLDPQIAIQRLLGRAPEEKTLFANWDKSWWKIYNIIIEEMKKRKTY
CHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
QGKKFEYLQGKALKKFIK
CCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIYYRYSKYLKEKYGVKTYKLPVNIPVSCPNRDGFLSEGGCSFCGEMGAGFENYPASMS
CCCHHHHHHHHHHHHCCEEEEEEEECEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCH
VKEQLEKNKTYIGNKYGAEKFIAYFQNFSNTYLPVEKLLKYLEEATEVNDIAAIILSTRP
HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DCINNVYLKKIKEKMEKKVPEINLGLELGLQTVNYHTLTRVNRGHTLGEVIDAILNAQKY
HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHCCHHC
NFEIGIHLILNLPGDNMVDVIENAKIISALKVDNVKLHALYIREGTEFAEKYKKGEFDII
EEEEEEEEEEECCCCCHHHHHHCCHHHHHEEECCEEEEEEEEECCHHHHHHHCCCCCEEE
PLEEYVERVITFLEYLDPQIAIQRLLGRAPEEKTLFANWDKSWWKIYNIIIEEMKKRKTY
CHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
QGKKFEYLQGKALKKFIK
CCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]