Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932031

Identifier: 220932031

GI number: 220932031

Start: 1289703

End: 1290254

Strand: Reverse

Name: 220932031

Synonym: Hore_11940

Alternate gene names: NA

Gene position: 1290254-1289703 (Counterclockwise)

Preceding gene: 220932032

Following gene: 220932030

Centisome position: 50.05

GC content: 32.79

Gene sequence:

>552_bases
GTGGAGATAAAAGGCATTAAAATAAATGTTGTTGTTTTGAGTATGCTTATTATTGTCCTGGCATTCTTTGCCGGTCAGCA
TTTATTTAAATTGTATAATATTGAAAAACCTTTAACCGATGAGCTTAAGTCTGTTAAAGGGGTTCAGGATGTTAAATTAC
TGGAAAGTGGCGACAAAACAGATGTAAGTGTAAAACTATCTTCAGATGTTGATTTTTATAAAAGGTATCATCAGCTTGAA
AAGATTGCCTCTGAAAAACTGGGGAATGAACTAGGAAAAATTATTGTCAATAATGAAGATAACTCACTTGAAGAAATTTA
TTATCAGATGCATTACTATATTTTTGAAGGAATTTCTACCTACCGCTTTAGTTATATGAAAAATGAAATCAAAGAAATAG
CAGAGAAAAATAACGTCAGTGACTACAGGGTATGGGTTGATGAAAAGGCTGTATATTTAAAGCTAAACAGGGGTAAAACC
TCTTATTATAAAGTAATACCCCGTCAGGGTATAACCGTATCTTTCAAGGCAGGAGGTGATAGTAGTGGTTAA

Upstream 100 bases:

>100_bases
TCCGGTTATATTTTTTTCTGGTAAAGATTACTTTTGTTATTGTGTAGAAACATAGGTTAGTTGTATGTTATAATAAACCG
CAGAAGGAAGGTGATTACCT

Downstream 100 bases:

>100_bases
AGAAGTAGGAATTGGAGCAGGAATTGGGGTTTTAATAATTCTTGCCCTTAAAGGTTTTAATATACTTCCGGTAATCTTTT
TTGGTTTTCTTGTGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MEIKGIKINVVVLSMLIIVLAFFAGQHLFKLYNIEKPLTDELKSVKGVQDVKLLESGDKTDVSVKLSSDVDFYKRYHQLE
KIASEKLGNELGKIIVNNEDNSLEEIYYQMHYYIFEGISTYRFSYMKNEIKEIAEKNNVSDYRVWVDEKAVYLKLNRGKT
SYYKVIPRQGITVSFKAGGDSSG

Sequences:

>Translated_183_residues
MEIKGIKINVVVLSMLIIVLAFFAGQHLFKLYNIEKPLTDELKSVKGVQDVKLLESGDKTDVSVKLSSDVDFYKRYHQLE
KIASEKLGNELGKIIVNNEDNSLEEIYYQMHYYIFEGISTYRFSYMKNEIKEIAEKNNVSDYRVWVDEKAVYLKLNRGKT
SYYKVIPRQGITVSFKAGGDSSG
>Mature_183_residues
MEIKGIKINVVVLSMLIIVLAFFAGQHLFKLYNIEKPLTDELKSVKGVQDVKLLESGDKTDVSVKLSSDVDFYKRYHQLE
KIASEKLGNELGKIIVNNEDNSLEEIYYQMHYYIFEGISTYRFSYMKNEIKEIAEKNNVSDYRVWVDEKAVYLKLNRGKT
SYYKVIPRQGITVSFKAGGDSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21057; Mature: 21057

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKGIKINVVVLSMLIIVLAFFAGQHLFKLYNIEKPLTDELKSVKGVQDVKLLESGDKT
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCC
DVSVKLSSDVDFYKRYHQLEKIASEKLGNELGKIIVNNEDNSLEEIYYQMHYYIFEGIST
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHH
YRFSYMKNEIKEIAEKNNVSDYRVWVDEKAVYLKLNRGKTSYYKVIPRQGITVSFKAGGD
HHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEEECCCC
SSG
CCC
>Mature Secondary Structure
MEIKGIKINVVVLSMLIIVLAFFAGQHLFKLYNIEKPLTDELKSVKGVQDVKLLESGDKT
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCCC
DVSVKLSSDVDFYKRYHQLEKIASEKLGNELGKIIVNNEDNSLEEIYYQMHYYIFEGIST
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHH
YRFSYMKNEIKEIAEKNNVSDYRVWVDEKAVYLKLNRGKTSYYKVIPRQGITVSFKAGGD
HHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEEECCCC
SSG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA