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The map label for this gene is trpH [H]

Identifier: 220932020

GI number: 220932020

Start: 1278574

End: 1279386

Strand: Reverse

Name: trpH [H]

Synonym: Hore_11830

Alternate gene names: 220932020

Gene position: 1279386-1278574 (Counterclockwise)

Preceding gene: 220932021

Following gene: 220932019

Centisome position: 49.62

GC content: 38.25

Gene sequence:

>813_bases
ATGTCAGTAGACTTACATATTCACACAAATGCATCTGATGGAAGTCTAAGCCCCGGGGAAGTTGTTAAAAAGGCAATAGA
TTTGGGATATAAAGCAATTGCTATTACGGACCATGATACCGTTGCCGGTATCATACCAGCCCTGCAGGTTGCCAGAAAAT
CTTCTCTGGAGGTTATTCCAGGAATTGAGATAAACACAGATATTGAAGATAGGGAGTTACATATCCTGGGTTATTTTATA
GATTATACAAAACCTGATCTGCTTAAAGAGTTAAGTTCACTTAAAAAAATGAGAGAAAAACGGGCCAGGAAAATGGTCCA
GAAATTACGTAACATGGGTATCAACATTGAATGGGAAGAAGTAATCAATATTGCCGGACAGGGAACAATTGGAAGAAGCC
ATATCTGTCAGGCTATAATAAATAAAGGTTATGCTGATTCCTGGAAAGAAGTTTTCGAAAAATATATTGGAAAAAATTCA
CCTGCCTATGTACCACGTAAAAAACTTACTCCATTAAAAGCCATAAAGCTTATTAAGGAATGTAGCGGGATACCGGTTAT
TGCTCATCCCGGGCTGGTAGGTGATGATGACCTGGTGAAATGGATTATCAAACACGGTATAGAAGGACTAGAAGTATTTT
ACTATGAACATAGTGAAGAAGAGTGTCAGAAATACTTGAATATGGCTAAAGAGAACAATTTGGTGGTTACTGGTGGCTCC
GATGATCATGGGCCTGGAAATAAAGATGGGTTGAGATTAGGAAAGATAAGACTGGATTATACCGTAGTTGAAGAGTTGAG
AAAACGGGTATAA

Upstream 100 bases:

>100_bases
TATTGATTGTTCTGTATAATAAAATAAACACAATCTTAATTGAACACACCATTAAATTGTAAATCAAGGGGGGAAAGATC
GGTTTTAACCGTATACAAAT

Downstream 100 bases:

>100_bases
TTTACCTTAAATATGTAAATGATATTAGTGATATCATAATTATACCCGGGGGTTATAAAATGCTAAATAAATGGATTGAT
ATGTTTGAAGAAATCTTTTA

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSVDLHIHTNASDGSLSPGEVVKKAIDLGYKAIAITDHDTVAGIIPALQVARKSSLEVIPGIEINTDIEDRELHILGYFI
DYTKPDLLKELSSLKKMREKRARKMVQKLRNMGINIEWEEVINIAGQGTIGRSHICQAIINKGYADSWKEVFEKYIGKNS
PAYVPRKKLTPLKAIKLIKECSGIPVIAHPGLVGDDDLVKWIIKHGIEGLEVFYYEHSEEECQKYLNMAKENNLVVTGGS
DDHGPGNKDGLRLGKIRLDYTVVEELRKRV

Sequences:

>Translated_270_residues
MSVDLHIHTNASDGSLSPGEVVKKAIDLGYKAIAITDHDTVAGIIPALQVARKSSLEVIPGIEINTDIEDRELHILGYFI
DYTKPDLLKELSSLKKMREKRARKMVQKLRNMGINIEWEEVINIAGQGTIGRSHICQAIINKGYADSWKEVFEKYIGKNS
PAYVPRKKLTPLKAIKLIKECSGIPVIAHPGLVGDDDLVKWIIKHGIEGLEVFYYEHSEEECQKYLNMAKENNLVVTGGS
DDHGPGNKDGLRLGKIRLDYTVVEELRKRV
>Mature_269_residues
SVDLHIHTNASDGSLSPGEVVKKAIDLGYKAIAITDHDTVAGIIPALQVARKSSLEVIPGIEINTDIEDRELHILGYFID
YTKPDLLKELSSLKKMREKRARKMVQKLRNMGINIEWEEVINIAGQGTIGRSHICQAIINKGYADSWKEVFEKYIGKNSP
AYVPRKKLTPLKAIKLIKECSGIPVIAHPGLVGDDDLVKWIIKHGIEGLEVFYYEHSEEECQKYLNMAKENNLVVTGGSD
DHGPGNKDGLRLGKIRLDYTVVEELRKRV

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=249, Percent_Identity=34.5381526104418, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30237; Mature: 30106

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDLHIHTNASDGSLSPGEVVKKAIDLGYKAIAITDHDTVAGIIPALQVARKSSLEVIP
CEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEC
GIEINTDIEDRELHILGYFIDYTKPDLLKELSSLKKMREKRARKMVQKLRNMGINIEWEE
CCEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
VINIAGQGTIGRSHICQAIINKGYADSWKEVFEKYIGKNSPAYVPRKKLTPLKAIKLIKE
HHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH
CSGIPVIAHPGLVGDDDLVKWIIKHGIEGLEVFYYEHSEEECQKYLNMAKENNLVVTGGS
HCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEECCC
DDHGPGNKDGLRLGKIRLDYTVVEELRKRV
CCCCCCCCCCEEEEEEEEHHHHHHHHHHCC
>Mature Secondary Structure 
SVDLHIHTNASDGSLSPGEVVKKAIDLGYKAIAITDHDTVAGIIPALQVARKSSLEVIP
EEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEC
GIEINTDIEDRELHILGYFIDYTKPDLLKELSSLKKMREKRARKMVQKLRNMGINIEWEE
CCEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
VINIAGQGTIGRSHICQAIINKGYADSWKEVFEKYIGKNSPAYVPRKKLTPLKAIKLIKE
HHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHH
CSGIPVIAHPGLVGDDDLVKWIIKHGIEGLEVFYYEHSEEECQKYLNMAKENNLVVTGGS
HCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEECCC
DDHGPGNKDGLRLGKIRLDYTVVEELRKRV
CCCCCCCCCCEEEEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]