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The map label for this gene is 220931973

Identifier: 220931973

GI number: 220931973

Start: 1229023

End: 1229862

Strand: Reverse

Name: 220931973

Synonym: Hore_11340

Alternate gene names: NA

Gene position: 1229862-1229023 (Counterclockwise)

Preceding gene: 220931984

Following gene: 220931971

Centisome position: 47.7

GC content: 31.67

Gene sequence:

>840_bases
ATGAAGAATAAAATAATAACAGATAGTTGCTGTGATCTACCAGACAATTTATTAAAAAAGCTTAAAAATGTTAGTATTGT
ACCTATGAATTTAACTGTAGATGGTGAACAATATGAAGATAGAAGGGACATAAGTCTTGAGACTTTTTATAAAAAGCTCA
AATCCTCAAGTAGTCATACAACATCAGCCAGTCCATCCCCGGTAAAATTCCTAAATGAATTAAGTGATGCTGAAAATTCT
TTTGTGGTAACAGTATCTTCCTCATTGAGCAGTAGTTATAATAACGCACTGCTGGCCAGGAAAATGTTACTTGATGATGT
TAAGGACAGGGCAGTACATATATTTGATTCTTTAAATGCTTCTGTCGGGCAGGGGTTAGTTGTTTTAAAAATAAATGAAT
TAATTAATAACGATGTTTCATTTAACGAAATTATAGAGACAACTGAGAATTATATAAAGAATTTAAAAACCTTTTTTATA
CTTGACAGGCTGGATAATCTAATGAAAAGTGGCCGTATAAACCGAATTCTGGGTAGAATAGTTTCTGCCCTTAATATTAA
GTTTATCATGGGAAAAAATGATAAGGGTAAAATTGATATTTATAGTAAAACAAGGGGTTCAAAGAGGGCCATGAAAAGAA
TTTTAAATATTATCGGTCAGTATGGTACCAATTTTCAGGATAAAATACTGGGAATAGCCCATTGCAACTGTTATGATAAA
GCCCTTAATTTAAAAGAAGAGATTCAGAAACAATATAATTTTAAAGATATTATAATTACTCCCATGGGTCCAACCATTTC
AGGTTATGCAGACCTTGGGGGAATACTGGTTAGTTTTTAA

Upstream 100 bases:

>100_bases
AATAGTAACAGTATTATTATACAGTAAAAAAAAAGGATTTTAAATTATTTAGGAGAAAGATATTAATAAACTAAAATTAT
ACCCGTTAAGGAGGTTTAAA

Downstream 100 bases:

>100_bases
TTTACCTGTCTATTGATCTATTTTGCCCTGTTTCTGCTTTACATCTATTTTTTTAACATACTTATTGCCTCATCAACATT
ATTGGTTGGCCTGCGACAGG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKNKIITDSCCDLPDNLLKKLKNVSIVPMNLTVDGEQYEDRRDISLETFYKKLKSSSSHTTSASPSPVKFLNELSDAENS
FVVTVSSSLSSSYNNALLARKMLLDDVKDRAVHIFDSLNASVGQGLVVLKINELINNDVSFNEIIETTENYIKNLKTFFI
LDRLDNLMKSGRINRILGRIVSALNIKFIMGKNDKGKIDIYSKTRGSKRAMKRILNIIGQYGTNFQDKILGIAHCNCYDK
ALNLKEEIQKQYNFKDIIITPMGPTISGYADLGGILVSF

Sequences:

>Translated_279_residues
MKNKIITDSCCDLPDNLLKKLKNVSIVPMNLTVDGEQYEDRRDISLETFYKKLKSSSSHTTSASPSPVKFLNELSDAENS
FVVTVSSSLSSSYNNALLARKMLLDDVKDRAVHIFDSLNASVGQGLVVLKINELINNDVSFNEIIETTENYIKNLKTFFI
LDRLDNLMKSGRINRILGRIVSALNIKFIMGKNDKGKIDIYSKTRGSKRAMKRILNIIGQYGTNFQDKILGIAHCNCYDK
ALNLKEEIQKQYNFKDIIITPMGPTISGYADLGGILVSF
>Mature_279_residues
MKNKIITDSCCDLPDNLLKKLKNVSIVPMNLTVDGEQYEDRRDISLETFYKKLKSSSSHTTSASPSPVKFLNELSDAENS
FVVTVSSSLSSSYNNALLARKMLLDDVKDRAVHIFDSLNASVGQGLVVLKINELINNDVSFNEIIETTENYIKNLKTFFI
LDRLDNLMKSGRINRILGRIVSALNIKFIMGKNDKGKIDIYSKTRGSKRAMKRILNIIGQYGTNFQDKILGIAHCNCYDK
ALNLKEEIQKQYNFKDIIITPMGPTISGYADLGGILVSF

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31306; Mature: 31306

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKIITDSCCDLPDNLLKKLKNVSIVPMNLTVDGEQYEDRRDISLETFYKKLKSSSSHT
CCCCCCCCHHCCCCHHHHHHHCCCEEEEEEEEECCHHCCCCCCCCHHHHHHHHHCCCCCC
TSASPSPVKFLNELSDAENSFVVTVSSSLSSSYNNALLARKMLLDDVKDRAVHIFDSLNA
CCCCCCHHHHHHHHCCCCCCEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SVGQGLVVLKINELINNDVSFNEIIETTENYIKNLKTFFILDRLDNLMKSGRINRILGRI
HHCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VSALNIKFIMGKNDKGKIDIYSKTRGSKRAMKRILNIIGQYGTNFQDKILGIAHCNCYDK
HHHHCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEHCCCHHHH
ALNLKEEIQKQYNFKDIIITPMGPTISGYADLGGILVSF
HCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHCHHEECC
>Mature Secondary Structure
MKNKIITDSCCDLPDNLLKKLKNVSIVPMNLTVDGEQYEDRRDISLETFYKKLKSSSSHT
CCCCCCCCHHCCCCHHHHHHHCCCEEEEEEEEECCHHCCCCCCCCHHHHHHHHHCCCCCC
TSASPSPVKFLNELSDAENSFVVTVSSSLSSSYNNALLARKMLLDDVKDRAVHIFDSLNA
CCCCCCHHHHHHHHCCCCCCEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SVGQGLVVLKINELINNDVSFNEIIETTENYIKNLKTFFILDRLDNLMKSGRINRILGRI
HHCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VSALNIKFIMGKNDKGKIDIYSKTRGSKRAMKRILNIIGQYGTNFQDKILGIAHCNCYDK
HHHHCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHEEEHCCCHHHH
ALNLKEEIQKQYNFKDIIITPMGPTISGYADLGGILVSF
HCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]