Click here to switch to the map view.

The map label for this gene is yneB [H]

Identifier: 220931984

GI number: 220931984

Start: 1237850

End: 1238509

Strand: Reverse

Name: yneB [H]

Synonym: Hore_11450

Alternate gene names: 220931984

Gene position: 1238509-1237850 (Counterclockwise)

Preceding gene: 220931985

Following gene: 220931973

Centisome position: 48.04

GC content: 32.42

Gene sequence:

>660_bases
ATGAATGCAGTTATATACGCCAGGGTCAGTACTACAAAAGAAGAACAAAAAACAAGTCTTGACAGGCAAATTGACGAATT
AGTTGAATTTGCTTTTAAGAATGGCTTTAAAATTAAAAAAATAATAAAGGAAAAGGAAAGTGGTTTCTCTGAAGAGAGAG
ATGGTATTTTAAAAGTCCTTGATCTTATAAAAGAAGGATTTGTAGAATATGTTATAGTTCAGGATAGTACCCGTCTTGGA
AGGGGTAATACTAAAATGGCCCTTATTCATCAAATACATAAACTTGGCGGGAAAGTAATAACCCTTGAAGATAAAGGTCC
TATCGCTCTGAATGACCTGGAAGAGATGATTATTGAAATTTTATGTGTTGTTGAAGAATACCAACAAAAGCTAGTAAATA
GAAAAATAAGTAGAGGTATGCGTAAAGCAATAAATGAAAAGAAGTATAAACCACACAAAAATTTAAAATATAAAAAAAGG
AATAAGAATGGAGGCAGGAAGAAAAAGAAGGTTCCGGTTGAAGAAATTATTAAATTGAGAAATAAAAAGTTAACATTTTC
TGAGATTGCAGCAACCTTGAGGGGACTGGGCTATGATGTATCCAGAGCAACAGTTCACAGACGATATCAGGAATTTAAAA
AATCAAAACTAAACTCCTGA

Upstream 100 bases:

>100_bases
CCAGTTAATTGATTCCAGTTATATTGATTTTTAATTTCCAGTATATAGACTATAAAATAAAAATACAAATTTTTAATTAT
GAATAAGGAGTTGTTTTTTA

Downstream 100 bases:

>100_bases
AATAATCAGGAGTTTTTTTTAATTTTTTTCATCTCAAAATTAAAAGTTAACTTGTCAATTGAGATATTACAGAAAAATGT
TATAAATAAAATATTATAAT

Product: Resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNAVIYARVSTTKEEQKTSLDRQIDELVEFAFKNGFKIKKIIKEKESGFSEERDGILKVLDLIKEGFVEYVIVQDSTRLG
RGNTKMALIHQIHKLGGKVITLEDKGPIALNDLEEMIIEILCVVEEYQQKLVNRKISRGMRKAINEKKYKPHKNLKYKKR
NKNGGRKKKKVPVEEIIKLRNKKLTFSEIAATLRGLGYDVSRATVHRRYQEFKKSKLNS

Sequences:

>Translated_219_residues
MNAVIYARVSTTKEEQKTSLDRQIDELVEFAFKNGFKIKKIIKEKESGFSEERDGILKVLDLIKEGFVEYVIVQDSTRLG
RGNTKMALIHQIHKLGGKVITLEDKGPIALNDLEEMIIEILCVVEEYQQKLVNRKISRGMRKAINEKKYKPHKNLKYKKR
NKNGGRKKKKVPVEEIIKLRNKKLTFSEIAATLRGLGYDVSRATVHRRYQEFKKSKLNS
>Mature_219_residues
MNAVIYARVSTTKEEQKTSLDRQIDELVEFAFKNGFKIKKIIKEKESGFSEERDGILKVLDLIKEGFVEYVIVQDSTRLG
RGNTKMALIHQIHKLGGKVITLEDKGPIALNDLEEMIIEILCVVEEYQQKLVNRKISRGMRKAINEKKYKPHKNLKYKKR
NKNGGRKKKKVPVEEIIKLRNKKLTFSEIAATLRGLGYDVSRATVHRRYQEFKKSKLNS

Specific function: This Protein Catalyzes The Site-Specific Recombination Of The Transposon And Also Regulates Its Frequency Of Transposition. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006119 [H]

Pfam domain/function: PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 25391; Mature: 25391

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVIYARVSTTKEEQKTSLDRQIDELVEFAFKNGFKIKKIIKEKESGFSEERDGILKVL
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
DLIKEGFVEYVIVQDSTRLGRGNTKMALIHQIHKLGGKVITLEDKGPIALNDLEEMIIEI
HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHH
LCVVEEYQQKLVNRKISRGMRKAINEKKYKPHKNLKYKKRNKNGGRKKKKVPVEEIIKLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
NKKLTFSEIAATLRGLGYDVSRATVHRRYQEFKKSKLNS
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAVIYARVSTTKEEQKTSLDRQIDELVEFAFKNGFKIKKIIKEKESGFSEERDGILKVL
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
DLIKEGFVEYVIVQDSTRLGRGNTKMALIHQIHKLGGKVITLEDKGPIALNDLEEMIIEI
HHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHH
LCVVEEYQQKLVNRKISRGMRKAINEKKYKPHKNLKYKKRNKNGGRKKKKVPVEEIIKLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHH
NKKLTFSEIAATLRGLGYDVSRATVHRRYQEFKKSKLNS
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377 [H]