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The map label for this gene is yloA [H]

Identifier: 220931821

GI number: 220931821

Start: 1065582

End: 1067339

Strand: Reverse

Name: yloA [H]

Synonym: Hore_09780

Alternate gene names: 220931821

Gene position: 1067339-1065582 (Counterclockwise)

Preceding gene: 220931851

Following gene: 220931812

Centisome position: 41.4

GC content: 34.07

Gene sequence:

>1758_bases
ATGGCACTTGATGGAATTATGCTAGCGGCAATTAAAAAAGAGCTGACCGAAGAACTACAGGGGGCAAGGGTTGATAAAAT
ATATCAGCCTGAAGCTGACAATTTAACCTTTACCCTGAGACAACCAGGTCAAAATATTAATCTTTTTATCTCAGCCGGAG
CCAGAAACCCCAGAATACATATTACCTCACTTAAATTCAAAAATCCCTTGACCCCACCAGCTTTTTGTATGTTATTACGA
AAATACCTTATTAATGGAACCATCGGGGAGATAAAACAACCTGATTTTGAACGAATTCTGGAAATAACCATAAATAAAAA
AAATAATATTTACAGGCTAATAATAGAAATAATGGGCAGGCACAGTAATATAATCCTGACTGATGACAATGGTTACATAC
TCGATGCCATAAAGAGAATTACTAAAGAAGTTAATACTAAAAGGGAACTATACCCTGGAATAAAGTATCATTATCCTCCC
AGGCAGGATAAATTAAATCCCCTTAAGGTAACCAGGGAAGAGTTTTTTAAAAAGATTCCTGATGATTTTTCCCAGTCCTC
TTTCAAGGCCATTATGTATAATTTTAGGGGGATTGGACCCAACATGGCAAAAGAAATTGTTTATAGGTCGGGACTTGACC
ATAAAAAACCCTACGGCGGTTTATCACCTTTTGAAAGAAATAAATTATGGGATGGTTTTAATAATATATTTAGGCTCGTT
ATTGAGGGTAAATTTAAACCAACTATTGGTATTGATAATAATAATAATATCTGTTATTTTTCCGCCTTTCCCCTTGAACA
TAATAAGGATATTAAAAAAGATTTAATATTTGATAATACAGCTTCCCTGTTTGATTATTACTATGAAAACAAAATTAAAT
TAGCCCATATTGGTAGTATTAAAAATAGTCTAATCAAGGTTGTATCCAACTATTTAAAGAAAAATCGAAAAAAAAGAAAT
AAACTGAGAAAACAGCTTAATGAGAGTAAAAGGGCGGACGAATATAAAAAAATAGGCGAGTTAATAAAGGCCAATATGTA
TATATTGACAAAGGGAATGAAACAGGCTGAAGTTATTGATTATTTTAGTCCGGGTCAGGAAAAAACCAACATCAAACTTG
ATCCTAAGTTAAGTCCTTCAGAAAATGCCCAGCGATATTTCAAAAAATACAACAAAGCTAAAAAGGGTGTAAAATATATC
AAAAGGGAATTAAGGAAATTAAAACATGAAGAAAGATACCTAGAGCAGGTCATGTTAAATCTGGAACAGGCTGAAAGCAG
GGAGGAAATCAGGGAAATAAAAGAAGAGCTAGGGGATGAAGGTTATATTAAAAAAAAGAACAGGATAAATAATAGAAGAA
AACAACAAAAACCCTTACCCCCTCTCAGGTTTAAAGCAACAACCGGTCATGATATCCTGGTTGGTCGGAATAATCGCCAG
AATGATAAACTCAGTAAAAAGATAGCAAATAATCAGGATTTATGGCTCCATGTCAAAGAATTACCTGGTTCCCACGTTAT
AATCAGGAATCATACCGGGGATGAAATACCGACCAGAACAATAAAAGAGGCAGCTATTATCGCTGCCTACTATAGCAAAG
GAAGGATGTCAGAAAACGTTCCGGTCGATTATACTGAGATAAAACATGTCAAAAAACCAAAAGGTGCTAAACCTGGTCTG
GTCTATTATGAAAATTATAAAACTATTTACGTCAATCCAGACAAAAAAATAATCGAAAAACTGGCCTATCAAAAATGA

Upstream 100 bases:

>100_bases
CATAATAATCATATTCATAGCCAGTGTCAAAAAGAACAAAATAAATTGACTCATACTACAAGATGGCATATACTATCATA
TAGATAAGGAGTTGATTTTA

Downstream 100 bases:

>100_bases
TCCCGGTAGACTTTTAATAAAAACCAGACTATTAAAAGTAATAATATTAGAAAGGCCGGTAAATCACCAGCTAACTGATA
TATGGTTGTACCCCTTCCTT

Product: Fibronectin-binding A domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MALDGIMLAAIKKELTEELQGARVDKIYQPEADNLTFTLRQPGQNINLFISAGARNPRIHITSLKFKNPLTPPAFCMLLR
KYLINGTIGEIKQPDFERILEITINKKNNIYRLIIEIMGRHSNIILTDDNGYILDAIKRITKEVNTKRELYPGIKYHYPP
RQDKLNPLKVTREEFFKKIPDDFSQSSFKAIMYNFRGIGPNMAKEIVYRSGLDHKKPYGGLSPFERNKLWDGFNNIFRLV
IEGKFKPTIGIDNNNNICYFSAFPLEHNKDIKKDLIFDNTASLFDYYYENKIKLAHIGSIKNSLIKVVSNYLKKNRKKRN
KLRKQLNESKRADEYKKIGELIKANMYILTKGMKQAEVIDYFSPGQEKTNIKLDPKLSPSENAQRYFKKYNKAKKGVKYI
KRELRKLKHEERYLEQVMLNLEQAESREEIREIKEELGDEGYIKKKNRINNRRKQQKPLPPLRFKATTGHDILVGRNNRQ
NDKLSKKIANNQDLWLHVKELPGSHVIIRNHTGDEIPTRTIKEAAIIAAYYSKGRMSENVPVDYTEIKHVKKPKGAKPGL
VYYENYKTIYVNPDKKIIEKLAYQK

Sequences:

>Translated_585_residues
MALDGIMLAAIKKELTEELQGARVDKIYQPEADNLTFTLRQPGQNINLFISAGARNPRIHITSLKFKNPLTPPAFCMLLR
KYLINGTIGEIKQPDFERILEITINKKNNIYRLIIEIMGRHSNIILTDDNGYILDAIKRITKEVNTKRELYPGIKYHYPP
RQDKLNPLKVTREEFFKKIPDDFSQSSFKAIMYNFRGIGPNMAKEIVYRSGLDHKKPYGGLSPFERNKLWDGFNNIFRLV
IEGKFKPTIGIDNNNNICYFSAFPLEHNKDIKKDLIFDNTASLFDYYYENKIKLAHIGSIKNSLIKVVSNYLKKNRKKRN
KLRKQLNESKRADEYKKIGELIKANMYILTKGMKQAEVIDYFSPGQEKTNIKLDPKLSPSENAQRYFKKYNKAKKGVKYI
KRELRKLKHEERYLEQVMLNLEQAESREEIREIKEELGDEGYIKKKNRINNRRKQQKPLPPLRFKATTGHDILVGRNNRQ
NDKLSKKIANNQDLWLHVKELPGSHVIIRNHTGDEIPTRTIKEAAIIAAYYSKGRMSENVPVDYTEIKHVKKPKGAKPGL
VYYENYKTIYVNPDKKIIEKLAYQK
>Mature_584_residues
ALDGIMLAAIKKELTEELQGARVDKIYQPEADNLTFTLRQPGQNINLFISAGARNPRIHITSLKFKNPLTPPAFCMLLRK
YLINGTIGEIKQPDFERILEITINKKNNIYRLIIEIMGRHSNIILTDDNGYILDAIKRITKEVNTKRELYPGIKYHYPPR
QDKLNPLKVTREEFFKKIPDDFSQSSFKAIMYNFRGIGPNMAKEIVYRSGLDHKKPYGGLSPFERNKLWDGFNNIFRLVI
EGKFKPTIGIDNNNNICYFSAFPLEHNKDIKKDLIFDNTASLFDYYYENKIKLAHIGSIKNSLIKVVSNYLKKNRKKRNK
LRKQLNESKRADEYKKIGELIKANMYILTKGMKQAEVIDYFSPGQEKTNIKLDPKLSPSENAQRYFKKYNKAKKGVKYIK
RELRKLKHEERYLEQVMLNLEQAESREEIREIKEELGDEGYIKKKNRINNRRKQQKPLPPLRFKATTGHDILVGRNNRQN
DKLSKKIANNQDLWLHVKELPGSHVIIRNHTGDEIPTRTIKEAAIIAAYYSKGRMSENVPVDYTEIKHVKKPKGAKPGLV
YYENYKTIYVNPDKKIIEKLAYQK

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

Organism=Homo sapiens, GI32130516, Length=153, Percent_Identity=32.6797385620915, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 68315; Mature: 68184

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDGIMLAAIKKELTEELQGARVDKIYQPEADNLTFTLRQPGQNINLFISAGARNPRIH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEE
ITSLKFKNPLTPPAFCMLLRKYLINGTIGEIKQPDFERILEITINKKNNIYRLIIEIMGR
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHCC
HSNIILTDDNGYILDAIKRITKEVNTKRELYPGIKYHYPPRQDKLNPLKVTREEFFKKIP
CCCEEEECCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
DDFSQSSFKAIMYNFRGIGPNMAKEIVYRSGLDHKKPYGGLSPFERNKLWDGFNNIFRLV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IEGKFKPTIGIDNNNNICYFSAFPLEHNKDIKKDLIFDNTASLFDYYYENKIKLAHIGSI
CCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEEECCHH
KNSLIKVVSNYLKKNRKKRNKLRKQLNESKRADEYKKIGELIKANMYILTKGMKQAEVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
YFSPGQEKTNIKLDPKLSPSENAQRYFKKYNKAKKGVKYIKRELRKLKHEERYLEQVMLN
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQAESREEIREIKEELGDEGYIKKKNRINNRRKQQKPLPPLRFKATTGHDILVGRNNRQ
HHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCC
NDKLSKKIANNQDLWLHVKELPGSHVIIRNHTGDEIPTRTIKEAAIIAAYYSKGRMSENV
CHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PVDYTEIKHVKKPKGAKPGLVYYENYKTIYVNPDKKIIEKLAYQK
CCCHHHHHHHCCCCCCCCCEEEEECEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
ALDGIMLAAIKKELTEELQGARVDKIYQPEADNLTFTLRQPGQNINLFISAGARNPRIH
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEE
ITSLKFKNPLTPPAFCMLLRKYLINGTIGEIKQPDFERILEITINKKNNIYRLIIEIMGR
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHCC
HSNIILTDDNGYILDAIKRITKEVNTKRELYPGIKYHYPPRQDKLNPLKVTREEFFKKIP
CCCEEEECCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
DDFSQSSFKAIMYNFRGIGPNMAKEIVYRSGLDHKKPYGGLSPFERNKLWDGFNNIFRLV
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IEGKFKPTIGIDNNNNICYFSAFPLEHNKDIKKDLIFDNTASLFDYYYENKIKLAHIGSI
CCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHCCCEEEEECCHH
KNSLIKVVSNYLKKNRKKRNKLRKQLNESKRADEYKKIGELIKANMYILTKGMKQAEVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
YFSPGQEKTNIKLDPKLSPSENAQRYFKKYNKAKKGVKYIKRELRKLKHEERYLEQVMLN
CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQAESREEIREIKEELGDEGYIKKKNRINNRRKQQKPLPPLRFKATTGHDILVGRNNRQ
HHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCC
NDKLSKKIANNQDLWLHVKELPGSHVIIRNHTGDEIPTRTIKEAAIIAAYYSKGRMSENV
CHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PVDYTEIKHVKKPKGAKPGLVYYENYKTIYVNPDKKIIEKLAYQK
CCCHHHHHHHCCCCCCCCCEEEEECEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]