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The map label for this gene is pyrK [H]

Identifier: 220931784

GI number: 220931784

Start: 1013995

End: 1014813

Strand: Direct

Name: pyrK [H]

Synonym: Hore_09410

Alternate gene names: 220931784

Gene position: 1013995-1014813 (Clockwise)

Preceding gene: 220931783

Following gene: 220931785

Centisome position: 39.33

GC content: 39.44

Gene sequence:

>819_bases
GTGAAAAATTTCAGTGATATTATTCGGGAAGTTGGTGTTATTATGGCGATTGTCAAAAATAGCAAACAACTTGGAAATGG
TTATTACAGGTTAGATCTAGCTGATAGTATTATTGCCAGGAAAGGGATACCAGGTCAGTTTTTACATATAAAAATTAGCT
CTGATAATGTTTATGACCCTCTACTCAGGCGTCCCTTCAGTATTTATGATATAAACCGGGATAAGGGGATAGTTACCATT
GTTTACCGGGTAGTTGGGCGGGGCACCCAGATCCTCAAAGAAGTGGATAGAGGTAATCATCTGGATGTACTCGGTCCTCT
TGGTAGAGGTTTTTCAACAGACTGGAAAAATAAATTTTTAATCTTGATAGGTGGGGGCATGGGACTGGCACCATTATATT
TTCTGGCTAAAAAGCTGGTAACCAGTAACAGAGTTCTGGTACTGGCTGGTGGTAATTCAGAAGAGGATCTGGCTTTTTTT
AATGAAAGCTATGGTTTACTTGACCTGAATTTGTTAAACGCTACCCTGGATGGTAGTACAGGCTATAAGGGAAATGTCAT
TGAATTATTTGAAGAACAGCTTTCTTACTATAACCCGGATTATATTTTCGGGTGTGGCCCCCGGGGAATGTTAAAGAGAT
TGAAAGAAATTACAGAGGAACACAATTTGATGGGAGAAATTTCTTTAGAAGAAAGAATGGGTTGCGGGTATGGTGTCTGT
TTATCCTGTGTTTGCAACACTGAAAAAGGTAACCAGCGTGTCTGTAAGGAAGGGCCTGTTTTTAACATTAATGAGGTGAT
TTTTGATGGACAGGATTGA

Upstream 100 bases:

>100_bases
TGAATTGGTATAAGGTATAAATAAGCTAAGAAAATGTTTATATCCGGTTCCCGGTAAATTACCAAGGGAACCGAGTCTCT
CCATATACCAGGGAATATAT

Downstream 100 bases:

>100_bases
TCTTTCAGTTGATCTTGGTCCTTTAAGTTTAAAAAATCCAGTTATGACTGCTTCCGGTACCTGTGGATATGGTATTGAGT
TTAAAGATTATTATGATCTC

Product: dihydroorotate oxidase B, electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKNFSDIIREVGVIMAIVKNSKQLGNGYYRLDLADSIIARKGIPGQFLHIKISSDNVYDPLLRRPFSIYDINRDKGIVTI
VYRVVGRGTQILKEVDRGNHLDVLGPLGRGFSTDWKNKFLILIGGGMGLAPLYFLAKKLVTSNRVLVLAGGNSEEDLAFF
NESYGLLDLNLLNATLDGSTGYKGNVIELFEEQLSYYNPDYIFGCGPRGMLKRLKEITEEHNLMGEISLEERMGCGYGVC
LSCVCNTEKGNQRVCKEGPVFNINEVIFDGQD

Sequences:

>Translated_272_residues
MKNFSDIIREVGVIMAIVKNSKQLGNGYYRLDLADSIIARKGIPGQFLHIKISSDNVYDPLLRRPFSIYDINRDKGIVTI
VYRVVGRGTQILKEVDRGNHLDVLGPLGRGFSTDWKNKFLILIGGGMGLAPLYFLAKKLVTSNRVLVLAGGNSEEDLAFF
NESYGLLDLNLLNATLDGSTGYKGNVIELFEEQLSYYNPDYIFGCGPRGMLKRLKEITEEHNLMGEISLEERMGCGYGVC
LSCVCNTEKGNQRVCKEGPVFNINEVIFDGQD
>Mature_272_residues
MKNFSDIIREVGVIMAIVKNSKQLGNGYYRLDLADSIIARKGIPGQFLHIKISSDNVYDPLLRRPFSIYDINRDKGIVTI
VYRVVGRGTQILKEVDRGNHLDVLGPLGRGFSTDWKNKFLILIGGGMGLAPLYFLAKKLVTSNRVLVLAGGNSEEDLAFF
NESYGLLDLNLLNATLDGSTGYKGNVIELFEEQLSYYNPDYIFGCGPRGMLKRLKEITEEHNLMGEISLEERMGCGYGVC
LSCVCNTEKGNQRVCKEGPVFNINEVIFDGQD

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30306; Mature: 30306

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFSDIIREVGVIMAIVKNSKQLGNGYYRLDLADSIIARKGIPGQFLHIKISSDNVYDP
CCCHHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCH
LLRRPFSIYDINRDKGIVTIVYRVVGRGTQILKEVDRGNHLDVLGPLGRGFSTDWKNKFL
HHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEE
ILIGGGMGLAPLYFLAKKLVTSNRVLVLAGGNSEEDLAFFNESYGLLDLNLLNATLDGST
EEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEECCCCCEEEEEEEEEEECCCC
GYKGNVIELFEEQLSYYNPDYIFGCGPRGMLKRLKEITEEHNLMGEISLEERMGCGYGVC
CCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHH
LSCVCNTEKGNQRVCKEGPVFNINEVIFDGQD
HHEEECCCCCCCCHHCCCCEEEHHHEEECCCC
>Mature Secondary Structure
MKNFSDIIREVGVIMAIVKNSKQLGNGYYRLDLADSIIARKGIPGQFLHIKISSDNVYDP
CCCHHHHHHHHHHHHHHHHCCHHHCCCEEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCH
LLRRPFSIYDINRDKGIVTIVYRVVGRGTQILKEVDRGNHLDVLGPLGRGFSTDWKNKFL
HHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEE
ILIGGGMGLAPLYFLAKKLVTSNRVLVLAGGNSEEDLAFFNESYGLLDLNLLNATLDGST
EEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEECCCCCEEEEEEEEEEECCCC
GYKGNVIELFEEQLSYYNPDYIFGCGPRGMLKRLKEITEEHNLMGEISLEERMGCGYGVC
CCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHH
LSCVCNTEKGNQRVCKEGPVFNINEVIFDGQD
HHEEECCCCCCCCHHCCCCEEEHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA