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The map label for this gene is yfcA [C]

Identifier: 220931734

GI number: 220931734

Start: 964423

End: 965166

Strand: Reverse

Name: yfcA [C]

Synonym: Hore_08910

Alternate gene names: 220931734

Gene position: 965166-964423 (Counterclockwise)

Preceding gene: 220931739

Following gene: 220931706

Centisome position: 37.44

GC content: 33.74

Gene sequence:

>744_bases
ATGCTATTCAAAATAATAATTATATTACTGGCTGGAACCGGAGCCGGTTTTATTAATACCATGGCCGGTGGTGGTTCCCT
CCTGACTTTACCTGCTTTAATTTTTATGGGACTCCCCCCGGCTGTAGCCAATGGTACAAACAGAATTGCTATATTACTAC
AGAATATTGTGGCAACTTTAAACTTTAAACAAAAAGGTTATTTTAACCTCAAAATATCATTAATGGTAGCTATTCCGGCT
GTCTTTGGATCATTTATAGGTGCCAGAATAGCAATAAATTTACCCGGAAAACTTTTTAATAAAATTCTGGCCCTGGTCAT
GATTACTATGTTAATTTTAATTCTCTGGAACCCTGGCCGAAATGTTAAGAAGCATAAAAATAGTTTATTGAATAATAAAA
TAACTACCATTATTGTATTTTTCTTTATAGGTATTTACGGGGGTTTTATTCAGGCTGGAGTCGGTATTCTAATAATCAGT
ACTTTAACAATTATGTCAGGTTTATCTCTGGTAAGGATTAATAGTATAAAGGTATTTGTTGTGGGGTTATATACTTTGTC
ATCTCTTATAATATTTATATCCACCAATAACATTGACTGGTTGGCCGGTTTGCTTCTGGCCTGTGGTAATTCCCTGGGAG
CCTATCTGGGAAGTAACCTTGCCATAAAAAAAGGTGATAAACCAATTAAATTTATATTAACAATTGCTGTAATCTCAATG
TCCATAAAATTAATAATTGAATAG

Upstream 100 bases:

>100_bases
ATCAGACTGGGAAAATAAACTAAACTATGGTATTATTAATTTAATCTATTATATCAATAAAGGTTATATGTAATTAAATA
AAAAATGGAGGTAAAAATAT

Downstream 100 bases:

>100_bases
GCACAAATTTTAATATAAAAGCTTTTGATATAAAAGGTATAATAATTTATTTTAATCATTGGTTCTTAAATTAATCATTG
CTTTTTAAAAATATAGATCC

Product: putative permease

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLFKIIIILLAGTGAGFINTMAGGGSLLTLPALIFMGLPPAVANGTNRIAILLQNIVATLNFKQKGYFNLKISLMVAIPA
VFGSFIGARIAINLPGKLFNKILALVMITMLILILWNPGRNVKKHKNSLLNNKITTIIVFFFIGIYGGFIQAGVGILIIS
TLTIMSGLSLVRINSIKVFVVGLYTLSSLIIFISTNNIDWLAGLLLACGNSLGAYLGSNLAIKKGDKPIKFILTIAVISM
SIKLIIE

Sequences:

>Translated_247_residues
MLFKIIIILLAGTGAGFINTMAGGGSLLTLPALIFMGLPPAVANGTNRIAILLQNIVATLNFKQKGYFNLKISLMVAIPA
VFGSFIGARIAINLPGKLFNKILALVMITMLILILWNPGRNVKKHKNSLLNNKITTIIVFFFIGIYGGFIQAGVGILIIS
TLTIMSGLSLVRINSIKVFVVGLYTLSSLIIFISTNNIDWLAGLLLACGNSLGAYLGSNLAIKKGDKPIKFILTIAVISM
SIKLIIE
>Mature_247_residues
MLFKIIIILLAGTGAGFINTMAGGGSLLTLPALIFMGLPPAVANGTNRIAILLQNIVATLNFKQKGYFNLKISLMVAIPA
VFGSFIGARIAINLPGKLFNKILALVMITMLILILWNPGRNVKKHKNSLLNNKITTIIVFFFIGIYGGFIQAGVGILIIS
TLTIMSGLSLVRINSIKVFVVGLYTLSSLIIFISTNNIDWLAGLLLACGNSLGAYLGSNLAIKKGDKPIKFILTIAVISM
SIKLIIE

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26433; Mature: 26433

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKIIIILLAGTGAGFINTMAGGGSLLTLPALIFMGLPPAVANGTNRIAILLQNIVATL
CHHHHEEHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHH
NFKQKGYFNLKISLMVAIPAVFGSFIGARIAINLPGKLFNKILALVMITMLILILWNPGR
CCCCCCEEEEEEEHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHEECCCC
NVKKHKNSLLNNKITTIIVFFFIGIYGGFIQAGVGILIISTLTIMSGLSLVRINSIKVFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEE
VGLYTLSSLIIFISTNNIDWLAGLLLACGNSLGAYLGSNLAIKKGDKPIKFILTIAVISM
EHHHHHHCEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHH
SIKLIIE
HEEEEEC
>Mature Secondary Structure
MLFKIIIILLAGTGAGFINTMAGGGSLLTLPALIFMGLPPAVANGTNRIAILLQNIVATL
CHHHHEEHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHH
NFKQKGYFNLKISLMVAIPAVFGSFIGARIAINLPGKLFNKILALVMITMLILILWNPGR
CCCCCCEEEEEEEHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHEECCCC
NVKKHKNSLLNNKITTIIVFFFIGIYGGFIQAGVGILIISTLTIMSGLSLVRINSIKVFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEE
VGLYTLSSLIIFISTNNIDWLAGLLLACGNSLGAYLGSNLAIKKGDKPIKFILTIAVISM
EHHHHHHCEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHH
SIKLIIE
HEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]