Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is glgP [H]

Identifier: 220931706

GI number: 220931706

Start: 929492

End: 931129

Strand: Reverse

Name: glgP [H]

Synonym: Hore_08630

Alternate gene names: 220931706

Gene position: 931129-929492 (Counterclockwise)

Preceding gene: 220931734

Following gene: 220931701

Centisome position: 36.12

GC content: 39.74

Gene sequence:

>1638_bases
ATGGCTGAAAACAAAGAAAAAATAGCTTATTTTTGTATGGAATATGGTCTTGATCAAAAATTACCCCTTTATGCCGGGGG
TCTGGGGGTTTTAGCCGGGGATTATTTGAAAGCTGCCCATGACAAAAAGGCCCCGATTATCGGTATAGGTATGCTCTGGT
GGCAGGATTATACAACCCAGCTTATTGGTAAAGATGGTTATCCCCATGATACGTATCCAACATATAGCTTTGATTATATA
GAAGATACAGGGATTACTGTTACTGTCCAGATTGAAGGAAAAGACGTAAACTGTAAAATCTATAAAACTAATCAGTTTGA
AAATGCCCCCCTGTACTTGCTTGATGCCGGCCATCCTGATAGTGAATTTGGCTGGATTAATGACAGATTATATGGTGGTG
ATGACCGAAAAAGAATAGCCCAGGAAATTGTTCTGGGAATAGGTGGTGTCCGTGCTTTAAGGGCCCTAAATATTGAAGTC
GATAAATACCATTTCAATGAAGGTCATGCAGCCTTTGCTGGTTTTGAATTAATAAGGGAAAAAATGAATAACAACAATAT
GGATTTCGAAAATGCCCTGGAAGAGACCAGAAAGGAAATTGTTTTTACTACCCATACACCTGTTTCAGCCGGTAATGAAC
AGCACCACCTGGATTTAATTGAAAGTATGGGAGCTAACAATGGACTAACAAGAGAACAATTATGGCAAATCGGTGGCGAT
CCCTTTAATATGACAGCCGCCTGTTTACATATGTCATATGTTGCAAATGGTGTTTCCAAACTCCATGGAGAAACGGCCAG
GCGAATGTGGCAGCATCTTGATAAAAAAGCCCCTATTATCTCTATCACCAATGGAGTTCATGTTAAAACATGGCAAAACC
CTGAAATTAAAGAAGCCTTTGAGCAAAATAAAAACCTGTGGGATGTTCATATGAAGTATAAAAAGAAACTGGTTAATTTC
ATTGCGGAAAAAACAGATGCCAGGATGAACCCAGATAACCTTATCGTCGGCTTTGCCCGTCGGGCTGCCCCCTATAAAAG
AAGTGAACTAATATTCAGAGATACAGACAAAATTGATGATCTATTAACATCTGGTAAAATGCAGCTTGTTTTCTCCGGTA
AAGCCCACCCCAATGACCATTACGGTAAAGATATTGTCGCTACCCTGGTCAAAATGGATCAAAAGTACAAAGATAATGTA
GTATTTTTAGAAAATTACGGTATGAAAATAACCAAATATCTGGTTCAGGGCTGTGATGTCTGGTTAAATAACCCCAGACG
CCCTCTCGAAGCCAGTGGTACTTCCGGTATGAAGGCAGCAATAAACGGTGTTCTTAATCTCAGTGTCCTTGATGGCTGGG
TTGCTGAAGGGCCAGAACATGGTATCAGTGGCTGGATTATTGATGAAGTCTTTGAGAGCCTGGATGAAAAACTTGAAGAA
GATGAAAAAGACCTTAAGGCCCTTTACAAAATATTAAGGGAAGAAGTTATCCCTATTTACTATAATGACAGGGATAGATG
GGAAGAAATGATGAAAGCCAGTATTGCCATGTCACACCGTAAGTTTTCAGCAGCACGAATGTTAGAAGATTATTACAACC
TTATGTATAATAAAAAAGCCGAGCCTGCCCTGATTTAA

Upstream 100 bases:

>100_bases
CTGCTTATTAATAAATATATATCAAAATTACAGTTAAATTAAGAATAAAATAAGTTCTACTATTCCACAATATAAAAGAA
CACTAAAAAGGAGGACATTA

Downstream 100 bases:

>100_bases
GCGGGCAGCTCCTCGGCCTTCTTTTTTAAATTTCTACCATAATAGTTGGTACCCCAAACCCCAGTTATAATCATAACAGC
TCCTATTATCTGAAACCAGT

Product: alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MAENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQLIGKDGYPHDTYPTYSFDYI
EDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPDSEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEV
DKYHFNEGHAAFAGFELIREKMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD
PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAFEQNKNLWDVHMKYKKKLVNF
IAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDDLLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNV
VFLENYGMKITKYLVQGCDVWLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE
DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKAEPALI

Sequences:

>Translated_545_residues
MAENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQLIGKDGYPHDTYPTYSFDYI
EDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPDSEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEV
DKYHFNEGHAAFAGFELIREKMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD
PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAFEQNKNLWDVHMKYKKKLVNF
IAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDDLLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNV
VFLENYGMKITKYLVQGCDVWLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE
DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKAEPALI
>Mature_544_residues
AENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQLIGKDGYPHDTYPTYSFDYIE
DTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPDSEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEVD
KYHFNEGHAAFAGFELIREKMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGDP
FNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAFEQNKNLWDVHMKYKKKLVNFI
AEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDDLLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNVV
FLENYGMKITKYLVQGCDVWLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEED
EKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKAEPALI

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI71037379, Length=401, Percent_Identity=23.9401496259352, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI255653002, Length=401, Percent_Identity=23.9401496259352, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI21361370, Length=390, Percent_Identity=24.3589743589744, Blast_Score=76, Evalue=8e-14,
Organism=Escherichia coli, GI2367228, Length=387, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32566204, Length=491, Percent_Identity=21.3849287169043, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17564550, Length=491, Percent_Identity=21.3849287169043, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011834
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 62233; Mature: 62101

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQ
CCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
LIGKDGYPHDTYPTYSFDYIEDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPD
HHCCCCCCCCCCCCCEECCEECCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCC
SEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEVDKYHFNEGHAAFAGFELIRE
CCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHH
KMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD
HHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCC
PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHH
EQNKNLWDVHMKYKKKLVNFIAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDD
HCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCEEECCCHHHHH
LLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNVVFLENYGMKITKYLVQGCDV
HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
WLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE
HCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKA
HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EPALI
CCCCC
>Mature Secondary Structure 
AENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQ
CCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
LIGKDGYPHDTYPTYSFDYIEDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPD
HHCCCCCCCCCCCCCEECCEECCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCC
SEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEVDKYHFNEGHAAFAGFELIRE
CCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHH
KMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD
HHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCC
PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHH
EQNKNLWDVHMKYKKKLVNFIAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDD
HCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCEEECCCHHHHH
LLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNVVFLENYGMKITKYLVQGCDV
HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
WLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE
HCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKA
HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EPALI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]