| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is glgP [H]
Identifier: 220931706
GI number: 220931706
Start: 929492
End: 931129
Strand: Reverse
Name: glgP [H]
Synonym: Hore_08630
Alternate gene names: 220931706
Gene position: 931129-929492 (Counterclockwise)
Preceding gene: 220931734
Following gene: 220931701
Centisome position: 36.12
GC content: 39.74
Gene sequence:
>1638_bases ATGGCTGAAAACAAAGAAAAAATAGCTTATTTTTGTATGGAATATGGTCTTGATCAAAAATTACCCCTTTATGCCGGGGG TCTGGGGGTTTTAGCCGGGGATTATTTGAAAGCTGCCCATGACAAAAAGGCCCCGATTATCGGTATAGGTATGCTCTGGT GGCAGGATTATACAACCCAGCTTATTGGTAAAGATGGTTATCCCCATGATACGTATCCAACATATAGCTTTGATTATATA GAAGATACAGGGATTACTGTTACTGTCCAGATTGAAGGAAAAGACGTAAACTGTAAAATCTATAAAACTAATCAGTTTGA AAATGCCCCCCTGTACTTGCTTGATGCCGGCCATCCTGATAGTGAATTTGGCTGGATTAATGACAGATTATATGGTGGTG ATGACCGAAAAAGAATAGCCCAGGAAATTGTTCTGGGAATAGGTGGTGTCCGTGCTTTAAGGGCCCTAAATATTGAAGTC GATAAATACCATTTCAATGAAGGTCATGCAGCCTTTGCTGGTTTTGAATTAATAAGGGAAAAAATGAATAACAACAATAT GGATTTCGAAAATGCCCTGGAAGAGACCAGAAAGGAAATTGTTTTTACTACCCATACACCTGTTTCAGCCGGTAATGAAC AGCACCACCTGGATTTAATTGAAAGTATGGGAGCTAACAATGGACTAACAAGAGAACAATTATGGCAAATCGGTGGCGAT CCCTTTAATATGACAGCCGCCTGTTTACATATGTCATATGTTGCAAATGGTGTTTCCAAACTCCATGGAGAAACGGCCAG GCGAATGTGGCAGCATCTTGATAAAAAAGCCCCTATTATCTCTATCACCAATGGAGTTCATGTTAAAACATGGCAAAACC CTGAAATTAAAGAAGCCTTTGAGCAAAATAAAAACCTGTGGGATGTTCATATGAAGTATAAAAAGAAACTGGTTAATTTC ATTGCGGAAAAAACAGATGCCAGGATGAACCCAGATAACCTTATCGTCGGCTTTGCCCGTCGGGCTGCCCCCTATAAAAG AAGTGAACTAATATTCAGAGATACAGACAAAATTGATGATCTATTAACATCTGGTAAAATGCAGCTTGTTTTCTCCGGTA AAGCCCACCCCAATGACCATTACGGTAAAGATATTGTCGCTACCCTGGTCAAAATGGATCAAAAGTACAAAGATAATGTA GTATTTTTAGAAAATTACGGTATGAAAATAACCAAATATCTGGTTCAGGGCTGTGATGTCTGGTTAAATAACCCCAGACG CCCTCTCGAAGCCAGTGGTACTTCCGGTATGAAGGCAGCAATAAACGGTGTTCTTAATCTCAGTGTCCTTGATGGCTGGG TTGCTGAAGGGCCAGAACATGGTATCAGTGGCTGGATTATTGATGAAGTCTTTGAGAGCCTGGATGAAAAACTTGAAGAA GATGAAAAAGACCTTAAGGCCCTTTACAAAATATTAAGGGAAGAAGTTATCCCTATTTACTATAATGACAGGGATAGATG GGAAGAAATGATGAAAGCCAGTATTGCCATGTCACACCGTAAGTTTTCAGCAGCACGAATGTTAGAAGATTATTACAACC TTATGTATAATAAAAAAGCCGAGCCTGCCCTGATTTAA
Upstream 100 bases:
>100_bases CTGCTTATTAATAAATATATATCAAAATTACAGTTAAATTAAGAATAAAATAAGTTCTACTATTCCACAATATAAAAGAA CACTAAAAAGGAGGACATTA
Downstream 100 bases:
>100_bases GCGGGCAGCTCCTCGGCCTTCTTTTTTAAATTTCTACCATAATAGTTGGTACCCCAAACCCCAGTTATAATCATAACAGC TCCTATTATCTGAAACCAGT
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MAENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQLIGKDGYPHDTYPTYSFDYI EDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPDSEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEV DKYHFNEGHAAFAGFELIREKMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAFEQNKNLWDVHMKYKKKLVNF IAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDDLLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNV VFLENYGMKITKYLVQGCDVWLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKAEPALI
Sequences:
>Translated_545_residues MAENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQLIGKDGYPHDTYPTYSFDYI EDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPDSEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEV DKYHFNEGHAAFAGFELIREKMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAFEQNKNLWDVHMKYKKKLVNF IAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDDLLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNV VFLENYGMKITKYLVQGCDVWLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKAEPALI >Mature_544_residues AENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQLIGKDGYPHDTYPTYSFDYIE DTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPDSEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEVD KYHFNEGHAAFAGFELIREKMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGDP FNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAFEQNKNLWDVHMKYKKKLVNFI AEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDDLLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNVV FLENYGMKITKYLVQGCDVWLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEED EKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKAEPALI
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=401, Percent_Identity=23.9401496259352, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI255653002, Length=401, Percent_Identity=23.9401496259352, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI21361370, Length=390, Percent_Identity=24.3589743589744, Blast_Score=76, Evalue=8e-14, Organism=Escherichia coli, GI2367228, Length=387, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI32566204, Length=491, Percent_Identity=21.3849287169043, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17564550, Length=491, Percent_Identity=21.3849287169043, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 62233; Mature: 62101
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQ CCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH LIGKDGYPHDTYPTYSFDYIEDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPD HHCCCCCCCCCCCCCEECCEECCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCC SEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEVDKYHFNEGHAAFAGFELIRE CCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHH KMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD HHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCC PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHH EQNKNLWDVHMKYKKKLVNFIAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDD HCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCEEECCCHHHHH LLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNVVFLENYGMKITKYLVQGCDV HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH WLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE HCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKA HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPALI CCCCC >Mature Secondary Structure AENKEKIAYFCMEYGLDQKLPLYAGGLGVLAGDYLKAAHDKKAPIIGIGMLWWQDYTTQ CCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH LIGKDGYPHDTYPTYSFDYIEDTGITVTVQIEGKDVNCKIYKTNQFENAPLYLLDAGHPD HHCCCCCCCCCCCCCEECCEECCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEECCCCC SEFGWINDRLYGGDDRKRIAQEIVLGIGGVRALRALNIEVDKYHFNEGHAAFAGFELIRE CCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHH KMNNNNMDFENALEETRKEIVFTTHTPVSAGNEQHHLDLIESMGANNGLTREQLWQIGGD HHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCC PFNMTAACLHMSYVANGVSKLHGETARRMWQHLDKKAPIISITNGVHVKTWQNPEIKEAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCHHHHHH EQNKNLWDVHMKYKKKLVNFIAEKTDARMNPDNLIVGFARRAAPYKRSELIFRDTDKIDD HCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCEEECCCHHHHH LLTSGKMQLVFSGKAHPNDHYGKDIVATLVKMDQKYKDNVVFLENYGMKITKYLVQGCDV HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH WLNNPRRPLEASGTSGMKAAINGVLNLSVLDGWVAEGPEHGISGWIIDEVFESLDEKLEE HCCCCCCCCCCCCCCCHHHHHHHHEEEHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH DEKDLKALYKILREEVIPIYYNDRDRWEEMMKASIAMSHRKFSAARMLEDYYNLMYNKKA HHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPALI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]