| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931680
Identifier: 220931680
GI number: 220931680
Start: 900770
End: 901645
Strand: Direct
Name: 220931680
Synonym: Hore_08360
Alternate gene names: NA
Gene position: 900770-901645 (Clockwise)
Preceding gene: 220931679
Following gene: 220931681
Centisome position: 34.94
GC content: 38.58
Gene sequence:
>876_bases ATGGTTAAATATAATAAAGAAAATTTAGTACAGGTTGCTGTCAAGGGGGAGATATCTCCTGCTGTTTTAGGCAGTGGATA TAAGGTTAAGCATGATGGTGAACCCTTTATCCTTCCAGGGGTAGGGGGGATTACCTATAATGTAAAAATTGGTGATCGGG TAATGTCCTGGGCAGGTGATCATGTTGAACCTGGGGTAAGCATTAAAATTAATAATAAAGAACCAAAAGGGGCAAATAAT GCTCTCAATATCTTATCTTGTATTGGTAACAAAGCCAAAGTGGTTAGTGGCGATGCTAAAGGTGCTGAGGGGTATGTAAC CGGAAAACATGGGGGAATTGAACATGTGCTGGTATATTTTCCTGATGAAGTGCTTCATAAGTTGACTATTGGTGACAAAA TTCAGATTAAGGCCTGGGGTCAGGGGTTAACCATAAATGATCTACCGGACATAAAAGTAATGAATCTTTCTCCAGAATTA TTTGAAAAAATGCCTCTTGATATTAAAGAGGGGCGCTTACAGGTTCCAGTTGTTGCTACTATTCCTCCTTATTTAATGGG ATCAGGCCTTGGAAGTTATACTGCTTCCCGGGGAGATTATGACTTAACAACTGCAGATATTGATGTACTTAAAGAGTATG GACTTGATAAATTGAGGTTTGGTGATATTGTAGCTTTGAAGGATACTGATAATAGATATGGGCGTTGTTACAGACAGGGG GCAATAAGCATAGGTGTAGTTGTCCATAGTAATTGTCTTAAAGCAGGTCACGGACCGGGAATAACAACTATTTTTACAGC AGTGAGTGATATGATAAAACCTGTTATTGATACAAAGGCAAACATAGCCAATTATCTGAATATAAGAAGCCTATAA
Upstream 100 bases:
>100_bases ATGATTTAAAAATATATGTTACGTTGAAGAGAAGTCAGGGCTCAGGTGAGATTATATGGGAATAAGATAAGATTAATACA AACATAGAGGAGGTAAAAAA
Downstream 100 bases:
>100_bases CCTGAAATTAAAACCTTATAGGATCGGTTTAATGTTTAAATTTAAAGGGGAGAAAAAATAATGTTGTTTATTTTTATGGG AGCCAGTTGTACTGGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVKYNKENLVQVAVKGEISPAVLGSGYKVKHDGEPFILPGVGGITYNVKIGDRVMSWAGDHVEPGVSIKINNKEPKGANN ALNILSCIGNKAKVVSGDAKGAEGYVTGKHGGIEHVLVYFPDEVLHKLTIGDKIQIKAWGQGLTINDLPDIKVMNLSPEL FEKMPLDIKEGRLQVPVVATIPPYLMGSGLGSYTASRGDYDLTTADIDVLKEYGLDKLRFGDIVALKDTDNRYGRCYRQG AISIGVVVHSNCLKAGHGPGITTIFTAVSDMIKPVIDTKANIANYLNIRSL
Sequences:
>Translated_291_residues MVKYNKENLVQVAVKGEISPAVLGSGYKVKHDGEPFILPGVGGITYNVKIGDRVMSWAGDHVEPGVSIKINNKEPKGANN ALNILSCIGNKAKVVSGDAKGAEGYVTGKHGGIEHVLVYFPDEVLHKLTIGDKIQIKAWGQGLTINDLPDIKVMNLSPEL FEKMPLDIKEGRLQVPVVATIPPYLMGSGLGSYTASRGDYDLTTADIDVLKEYGLDKLRFGDIVALKDTDNRYGRCYRQG AISIGVVVHSNCLKAGHGPGITTIFTAVSDMIKPVIDTKANIANYLNIRSL >Mature_291_residues MVKYNKENLVQVAVKGEISPAVLGSGYKVKHDGEPFILPGVGGITYNVKIGDRVMSWAGDHVEPGVSIKINNKEPKGANN ALNILSCIGNKAKVVSGDAKGAEGYVTGKHGGIEHVLVYFPDEVLHKLTIGDKIQIKAWGQGLTINDLPDIKVMNLSPEL FEKMPLDIKEGRLQVPVVATIPPYLMGSGLGSYTASRGDYDLTTADIDVLKEYGLDKLRFGDIVALKDTDNRYGRCYRQG AISIGVVVHSNCLKAGHGPGITTIFTAVSDMIKPVIDTKANIANYLNIRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31344; Mature: 31344
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKYNKENLVQVAVKGEISPAVLGSGYKVKHDGEPFILPGVGGITYNVKIGDRVMSWAGD CCEECCCCEEEEEEECCCCHHEECCCEEEEECCCCEEEECCCCEEEEEEECCHHHHCCCC HVEPGVSIKINNKEPKGANNALNILSCIGNKAKVVSGDAKGAEGYVTGKHGGIEHVLVYF CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEC PDEVLHKLTIGDKIQIKAWGQGLTINDLPDIKVMNLSPELFEKMPLDIKEGRLQVPVVAT CHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEEECCHHHHHHCCCCCCCCEEEEEEEEC IPPYLMGSGLGSYTASRGDYDLTTADIDVLKEYGLDKLRFGDIVALKDTDNRYGRCYRQG CCCHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCEECCCEEEEECCCCHHHHHHHCC AISIGVVVHSNCLKAGHGPGITTIFTAVSDMIKPVIDTKANIANYLNIRSL CEEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHEEECCC >Mature Secondary Structure MVKYNKENLVQVAVKGEISPAVLGSGYKVKHDGEPFILPGVGGITYNVKIGDRVMSWAGD CCEECCCCEEEEEEECCCCHHEECCCEEEEECCCCEEEECCCCEEEEEEECCHHHHCCCC HVEPGVSIKINNKEPKGANNALNILSCIGNKAKVVSGDAKGAEGYVTGKHGGIEHVLVYF CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEC PDEVLHKLTIGDKIQIKAWGQGLTINDLPDIKVMNLSPELFEKMPLDIKEGRLQVPVVAT CHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEEECCHHHHHHCCCCCCCCEEEEEEEEC IPPYLMGSGLGSYTASRGDYDLTTADIDVLKEYGLDKLRFGDIVALKDTDNRYGRCYRQG CCCHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCEECCCEEEEECCCCHHHHHHHCC AISIGVVVHSNCLKAGHGPGITTIFTAVSDMIKPVIDTKANIANYLNIRSL CEEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA