| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931681
Identifier: 220931681
GI number: 220931681
Start: 901706
End: 902164
Strand: Direct
Name: 220931681
Synonym: Hore_08370
Alternate gene names: NA
Gene position: 901706-902164 (Clockwise)
Preceding gene: 220931680
Following gene: 220931682
Centisome position: 34.97
GC content: 30.72
Gene sequence:
>459_bases ATGTTGTTTATTTTTATGGGAGCCAGTTGTACTGGAAAGACCTCAGTTGCTAATGAACTTAATAAAACAATACAGGGGGA TATTTATACTGGAAAAGATTATTTGAGATTTTCAAGAAATAGTGATGAAGCCTGGGGGAAATTCAAGGAGAAACTGATTG ATGTATCTACAAAAGATATAGACACTTCAATAATTTATGTAACAAATGAGATAGACCATGTTAATGAATTAAGTTTAATT AAAGATGCTATATTTATTAAATTTACTGCTGATTTAGAAACAATTAAGACAAGGTTTTCACAGAGAATGAATGGAAATTT GCCGGATCCGGTAGCTAAAATGTTGGAAAGACAGTCAAATGATTGGAAAAAAGTAGAAGTAGATTTTTGTCTTGATACTT CATCAGGAGTTACAGTTAAGGAAAGTGTTAATATGATCAGGGATAGATTTAGAATATAG
Upstream 100 bases:
>100_bases GGCAAACATAGCCAATTATCTGAATATAAGAAGCCTATAACCTGAAATTAAAACCTTATAGGATCGGTTTAATGTTTAAA TTTAAAGGGGAGAAAAAATA
Downstream 100 bases:
>100_bases GTTTAAAGTTTTCAGGGTTAAAAGCCCGGGGTATACAGGTATTAATGCTTTTTACTTATCCTGGTTCTGTATATCTCCGG GTATTATACTTATACATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MLFIFMGASCTGKTSVANELNKTIQGDIYTGKDYLRFSRNSDEAWGKFKEKLIDVSTKDIDTSIIYVTNEIDHVNELSLI KDAIFIKFTADLETIKTRFSQRMNGNLPDPVAKMLERQSNDWKKVEVDFCLDTSSGVTVKESVNMIRDRFRI
Sequences:
>Translated_152_residues MLFIFMGASCTGKTSVANELNKTIQGDIYTGKDYLRFSRNSDEAWGKFKEKLIDVSTKDIDTSIIYVTNEIDHVNELSLI KDAIFIKFTADLETIKTRFSQRMNGNLPDPVAKMLERQSNDWKKVEVDFCLDTSSGVTVKESVNMIRDRFRI >Mature_152_residues MLFIFMGASCTGKTSVANELNKTIQGDIYTGKDYLRFSRNSDEAWGKFKEKLIDVSTKDIDTSIIYVTNEIDHVNELSLI KDAIFIKFTADLETIKTRFSQRMNGNLPDPVAKMLERQSNDWKKVEVDFCLDTSSGVTVKESVNMIRDRFRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17418; Mature: 17418
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFIFMGASCTGKTSVANELNKTIQGDIYTGKDYLRFSRNSDEAWGKFKEKLIDVSTKDI CEEEEECCCCCCCHHHHHHHHHHHCCCEEECCHHEEECCCCCHHHHHHHHHHHCCCCCCC DTSIIYVTNEIDHVNELSLIKDAIFIKFTADLETIKTRFSQRMNGNLPDPVAKMLERQSN CCEEEEEECCCCCHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC DWKKVEVDFCLDTSSGVTVKESVNMIRDRFRI CCEEEEEEEEEECCCCEEHHHHHHHHHHHHCC >Mature Secondary Structure MLFIFMGASCTGKTSVANELNKTIQGDIYTGKDYLRFSRNSDEAWGKFKEKLIDVSTKDI CEEEEECCCCCCCHHHHHHHHHHHCCCEEECCHHEEECCCCCHHHHHHHHHHHCCCCCCC DTSIIYVTNEIDHVNELSLIKDAIFIKFTADLETIKTRFSQRMNGNLPDPVAKMLERQSN CCEEEEEECCCCCHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC DWKKVEVDFCLDTSSGVTVKESVNMIRDRFRI CCEEEEEEEEEECCCCEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA