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The map label for this gene is ytjP [H]

Identifier: 220931663

GI number: 220931663

Start: 881660

End: 883054

Strand: Direct

Name: ytjP [H]

Synonym: Hore_08190

Alternate gene names: 220931663

Gene position: 881660-883054 (Clockwise)

Preceding gene: 220931661

Following gene: 220931664

Centisome position: 34.2

GC content: 39.07

Gene sequence:

>1395_bases
GTGAGGTCAGAAGTTAACAGTAAAATAGATAGTTTAAAGGAAGATATTATAAAATCAACCCAGGAATTAGTTAAAATCAG
AAGTGTTGAGGAAAAGGGACAGGAAGGTAAACCTTTTGGTGAAGGGGTCAGTGATGCCCTGGAAAAAGCCCTGGAGATTG
GCAGAAATTTAGGGTTGAAGACAGGAAACGTAGACGGGTATGCTGGTTTTATAGAAATAGGTTGTGGTAAAGAAATGGTT
GGAATCCTTTGCCACCTTGATGTAGTTCCTGAAGGTAGTGGCTGGACTTACCCTCCCTATGGTGCTGAGATACATAATAA
TAAAATTTATGGCCGGGGTACTCTAGATAATAAAGGACCGGCTGTTGCCGCCCTATATGCCATGAAAGCGGTTAATGATC
TCGGTTTTGATTTAAATAAGAGGGTCAGATTGATACTGGGGACAGATGAAGAGAGTGGCTGGGAAGGTTTAAAATACTAT
CTGGAAAAAGAAGAAATACCTGATTCAGCCTTCAGCCCCGATGCTGAGTATCCTGTTATTCTTGGAGAAAAGGGTATACT
GAACATAAAAATTAAATCCTTATTTAATAATGAAAATAATAGTGGTTTAGTATCTATTAAAGGGGGAAATGCCCCCAATA
TGGTTCCTGATTATTGTGAAGCAGTATTTGATATTGTTGTTAACCATGATGAAATTGTTAGTAAACTCAATGAATTTAAA
GAGAGGACCGGGTTTAAATTAGAGGTTGAAAAGTCCGGGGAGAGTCTTATAATAAAATCTTACGGAAAATCAGCCCATGG
TAGCCTGCCAGAAGACGGTCATAATGCTATCTCACAGCTTATGGTGTTTCTTTCAGATATGATATCAACTGATGATGCTC
TGGGCAAATTTATTAAGTTTTATAAGGAGAGAATTGGAATGGAGTATTACGGGGAATCGATCGGTTGCCATTTACGTGAT
GATGTCTCAGGACCACTAACCTTTAATGTGGGTATGGTTAATATTAATCAAAATTCTGGAGAAATTATAGTAAACATCCG
TTATCCCGTGACTCTCTCCAGAGATAAAGTTTTAAATGGTATTAAACAAATAATTGATCAGACTGAGTTTAGACTGGAAG
AGATGGAACATATGGAACCGCTATATGTACCCAAGAATGATCCCCTGGTACAGAAATTGATGAAGGTGTATCGAGAATTT
ACCGGGGATGACAGGGACCCAATAACAATAGGTGGGGGAACTTATGCCAGGGCTGTTGAGAAAGCTGTAGCTTTTGGCCC
CATATTCCCGGGACAGCCTGAATTGGCTCATCAAAAGGATGAATATATAGATATTGACGACCTCATAAAGAATGCCAAAA
TCTATGCCAATGCAATCATTGAACTGGCCACATAA

Upstream 100 bases:

>100_bases
TAAATTAATTTATATAATTTTTAAGTTTAGGTAATATAATAGAGGAGAAAATACTTTTTATAGAGAAGTTTTAATTAGTA
ATAAAAAGGAGGGGTTTGGC

Downstream 100 bases:

>100_bases
TCAAAAAAAAGGGGCCACCCGTGGTGGCCCTTATTCCATCTTATCAATAGTAAGTATTTACTTAATTGTTGTTAATATAG
GGAAATTACTATATAATATA

Product: Xaa-His dipeptidase

Products: succinate; LL-2,6-diaminoheptanedioate

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MRSEVNSKIDSLKEDIIKSTQELVKIRSVEEKGQEGKPFGEGVSDALEKALEIGRNLGLKTGNVDGYAGFIEIGCGKEMV
GILCHLDVVPEGSGWTYPPYGAEIHNNKIYGRGTLDNKGPAVAALYAMKAVNDLGFDLNKRVRLILGTDEESGWEGLKYY
LEKEEIPDSAFSPDAEYPVILGEKGILNIKIKSLFNNENNSGLVSIKGGNAPNMVPDYCEAVFDIVVNHDEIVSKLNEFK
ERTGFKLEVEKSGESLIIKSYGKSAHGSLPEDGHNAISQLMVFLSDMISTDDALGKFIKFYKERIGMEYYGESIGCHLRD
DVSGPLTFNVGMVNINQNSGEIIVNIRYPVTLSRDKVLNGIKQIIDQTEFRLEEMEHMEPLYVPKNDPLVQKLMKVYREF
TGDDRDPITIGGGTYARAVEKAVAFGPIFPGQPELAHQKDEYIDIDDLIKNAKIYANAIIELAT

Sequences:

>Translated_464_residues
MRSEVNSKIDSLKEDIIKSTQELVKIRSVEEKGQEGKPFGEGVSDALEKALEIGRNLGLKTGNVDGYAGFIEIGCGKEMV
GILCHLDVVPEGSGWTYPPYGAEIHNNKIYGRGTLDNKGPAVAALYAMKAVNDLGFDLNKRVRLILGTDEESGWEGLKYY
LEKEEIPDSAFSPDAEYPVILGEKGILNIKIKSLFNNENNSGLVSIKGGNAPNMVPDYCEAVFDIVVNHDEIVSKLNEFK
ERTGFKLEVEKSGESLIIKSYGKSAHGSLPEDGHNAISQLMVFLSDMISTDDALGKFIKFYKERIGMEYYGESIGCHLRD
DVSGPLTFNVGMVNINQNSGEIIVNIRYPVTLSRDKVLNGIKQIIDQTEFRLEEMEHMEPLYVPKNDPLVQKLMKVYREF
TGDDRDPITIGGGTYARAVEKAVAFGPIFPGQPELAHQKDEYIDIDDLIKNAKIYANAIIELAT
>Mature_464_residues
MRSEVNSKIDSLKEDIIKSTQELVKIRSVEEKGQEGKPFGEGVSDALEKALEIGRNLGLKTGNVDGYAGFIEIGCGKEMV
GILCHLDVVPEGSGWTYPPYGAEIHNNKIYGRGTLDNKGPAVAALYAMKAVNDLGFDLNKRVRLILGTDEESGWEGLKYY
LEKEEIPDSAFSPDAEYPVILGEKGILNIKIKSLFNNENNSGLVSIKGGNAPNMVPDYCEAVFDIVVNHDEIVSKLNEFK
ERTGFKLEVEKSGESLIIKSYGKSAHGSLPEDGHNAISQLMVFLSDMISTDDALGKFIKFYKERIGMEYYGESIGCHLRD
DVSGPLTFNVGMVNINQNSGEIIVNIRYPVTLSRDKVLNGIKQIIDQTEFRLEEMEHMEPLYVPKNDPLVQKLMKVYREF
TGDDRDPITIGGGTYARAVEKAVAFGPIFPGQPELAHQKDEYIDIDDLIKNAKIYANAIIELAT

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.1.18

Molecular weight: Translated: 51401; Mature: 51401

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEVNSKIDSLKEDIIKSTQELVKIRSVEEKGQEGKPFGEGVSDALEKALEIGRNLGLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TGNVDGYAGFIEIGCGKEMVGILCHLDVVPEGSGWTYPPYGAEIHNNKIYGRGTLDNKGP
CCCCCCEEEEEEECCCHHHHHHHEEEEEEECCCCCCCCCCCCEEECCEEEECCCCCCCCC
AVAALYAMKAVNDLGFDLNKRVRLILGTDEESGWEGLKYYLEKEEIPDSAFSPDAEYPVI
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE
LGEKGILNIKIKSLFNNENNSGLVSIKGGNAPNMVPDYCEAVFDIVVNHDEIVSKLNEFK
ECCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
ERTGFKLEVEKSGESLIIKSYGKSAHGSLPEDGHNAISQLMVFLSDMISTDDALGKFIKF
HHCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YKERIGMEYYGESIGCHLRDDVSGPLTFNVGMVNINQNSGEIIVNIRYPVTLSRDKVLNG
HHHHCCHHHHCCCCCCEECCCCCCCEEEEEEEEEEECCCCEEEEEEECCEEECHHHHHHH
IKQIIDQTEFRLEEMEHMEPLYVPKNDPLVQKLMKVYREFTGDDRDPITIGGGTYARAVE
HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
KAVAFGPIFPGQPELAHQKDEYIDIDDLIKNAKIYANAIIELAT
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEHEEEECC
>Mature Secondary Structure
MRSEVNSKIDSLKEDIIKSTQELVKIRSVEEKGQEGKPFGEGVSDALEKALEIGRNLGLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
TGNVDGYAGFIEIGCGKEMVGILCHLDVVPEGSGWTYPPYGAEIHNNKIYGRGTLDNKGP
CCCCCCEEEEEEECCCHHHHHHHEEEEEEECCCCCCCCCCCCEEECCEEEECCCCCCCCC
AVAALYAMKAVNDLGFDLNKRVRLILGTDEESGWEGLKYYLEKEEIPDSAFSPDAEYPVI
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEE
LGEKGILNIKIKSLFNNENNSGLVSIKGGNAPNMVPDYCEAVFDIVVNHDEIVSKLNEFK
ECCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
ERTGFKLEVEKSGESLIIKSYGKSAHGSLPEDGHNAISQLMVFLSDMISTDDALGKFIKF
HHCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
YKERIGMEYYGESIGCHLRDDVSGPLTFNVGMVNINQNSGEIIVNIRYPVTLSRDKVLNG
HHHHCCHHHHCCCCCCEECCCCCCCEEEEEEEEEEECCCCEEEEEEECCEEECHHHHHHH
IKQIIDQTEFRLEEMEHMEPLYVPKNDPLVQKLMKVYREFTGDDRDPITIGGGTYARAVE
HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHH
KAVAFGPIFPGQPELAHQKDEYIDIDDLIKNAKIYANAIIELAT
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-succinyl-LL-2,6-diaminoheptanedioate; H2O

Specific reaction: N-succinyl-LL-2,6-diaminoheptanedioate + H2O = succinate + LL-2,6-diaminoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]