| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is thrC [H]
Identifier: 220931647
GI number: 220931647
Start: 862764
End: 863819
Strand: Direct
Name: thrC [H]
Synonym: Hore_08030
Alternate gene names: 220931647
Gene position: 862764-863819 (Clockwise)
Preceding gene: 220931646
Following gene: 220931648
Centisome position: 33.46
GC content: 44.03
Gene sequence:
>1056_bases ATGAAAAAATGGCCTGGAATAATTGAAGCTTATAGAGAATTTATGCCCCTTAAGGAAACAACAAAACCGGTAACCCTGCA GGAGGGAAATACCCCTTTAATATATGCTGACAGGTTAAGTGAAAAACTTGGTATTCAACTATACTTAAAATATGATGGAG CCAATCCAACTGGTTCTTTTAAAGATAGGGGTATGACTCTGGCTGTAACTAAAGCTATAGAAGATGGATCAGAGGCTATT ATGTGTGCATCAACAGGTAATACTTCTGCAGCAGCAGCAGCCTATGGGGCCAGAAGTGGCCTTAAGACAGCTGTAGTTAT TCCTGAAGGAAAGATAGCCCTGGGGAAACTGGCCCAGGCCTTAATGCATGGGGCTGAGGTAATACCTATCAAGGGAAATT TTGATGATGCCCTGGCTATAGTTAAGGAGATTACCAGTAAATATCCCATAACACTTGTTAATTCTTTAAATCCATACCGG ATAGAAGGCCAGAAAAGTGGTGCCTTTGAGGTCTGTGATCAACTCGGAAACGCCCCTGATGTTCTGGCTATACCGGTTGG TAATGCCGGAAATATAACTGCCTACTGGAAGGGTTTTAAAGAATATTACCGGGCTAAAAAGATAGAGTCATTGCCCCGTA TGCTTGGTTTTGAAGCTGAAGGTTCAGCAGCCATAGCTAAAAATACTGTAATCAGTGAACCGGAAACAATTGCTACTGCA ATAAGAATCGGTAATCCAGCCAGCTGGGATAAAGCTGTTAAAGCTGCTGAAGAATCCCGGGGTCTTATTGATTATGTAAC AGATAATGAGATTATTGAGACCTACAGGGAAATTGCCTCAGAGGTTGGTATATTTGCTGAGCCGGCGTCGGCCGCTTCAG TGGCAGGGGTTAAAAAAATGGTGGCCCGGAGTGTGATCAAGCCCGGGAGTCAGGTTGTGGCTGTCTTAACCGGTCACGGG CTTAAAGACCCAACCACTGCAATTGATACCATCAAAAAACCAGAACCTGTTTCCGCAGAGGTAGAGGCGGTTCTTGAGAA AATGGGAACATGGTAG
Upstream 100 bases:
>100_bases CTGTTAAAGAGCAATTTATTAATAAGTCATTAAAGGAATTAAAGAAGATTGAAGATGTTGTTAGCATTGATAGTTTAATA AGGGTTGAGGAGGAATCAAT
Downstream 100 bases:
>100_bases TAATACAGCGAATGGAGTTGGTATTATGGCTTTAATAGTACAAAAATACGGTGGTACATCGGTGGGAACTATTGAAAGGA TTAAAAATGTTGCCGACCGT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKKWPGIIEAYREFMPLKETTKPVTLQEGNTPLIYADRLSEKLGIQLYLKYDGANPTGSFKDRGMTLAVTKAIEDGSEAI MCASTGNTSAAAAAYGARSGLKTAVVIPEGKIALGKLAQALMHGAEVIPIKGNFDDALAIVKEITSKYPITLVNSLNPYR IEGQKSGAFEVCDQLGNAPDVLAIPVGNAGNITAYWKGFKEYYRAKKIESLPRMLGFEAEGSAAIAKNTVISEPETIATA IRIGNPASWDKAVKAAEESRGLIDYVTDNEIIETYREIASEVGIFAEPASAASVAGVKKMVARSVIKPGSQVVAVLTGHG LKDPTTAIDTIKKPEPVSAEVEAVLEKMGTW
Sequences:
>Translated_351_residues MKKWPGIIEAYREFMPLKETTKPVTLQEGNTPLIYADRLSEKLGIQLYLKYDGANPTGSFKDRGMTLAVTKAIEDGSEAI MCASTGNTSAAAAAYGARSGLKTAVVIPEGKIALGKLAQALMHGAEVIPIKGNFDDALAIVKEITSKYPITLVNSLNPYR IEGQKSGAFEVCDQLGNAPDVLAIPVGNAGNITAYWKGFKEYYRAKKIESLPRMLGFEAEGSAAIAKNTVISEPETIATA IRIGNPASWDKAVKAAEESRGLIDYVTDNEIIETYREIASEVGIFAEPASAASVAGVKKMVARSVIKPGSQVVAVLTGHG LKDPTTAIDTIKKPEPVSAEVEAVLEKMGTW >Mature_351_residues MKKWPGIIEAYREFMPLKETTKPVTLQEGNTPLIYADRLSEKLGIQLYLKYDGANPTGSFKDRGMTLAVTKAIEDGSEAI MCASTGNTSAAAAAYGARSGLKTAVVIPEGKIALGKLAQALMHGAEVIPIKGNFDDALAIVKEITSKYPITLVNSLNPYR IEGQKSGAFEVCDQLGNAPDVLAIPVGNAGNITAYWKGFKEYYRAKKIESLPRMLGFEAEGSAAIAKNTVISEPETIATA IRIGNPASWDKAVKAAEESRGLIDYVTDNEIIETYREIASEVGIFAEPASAASVAGVKKMVARSVIKPGSQVVAVLTGHG LKDPTTAIDTIKKPEPVSAEVEAVLEKMGTW
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1790207, Length=311, Percent_Identity=27.6527331189711, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI2367138, Length=313, Percent_Identity=25.5591054313099, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786185, Length=291, Percent_Identity=25.7731958762887, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322631, Length=268, Percent_Identity=25.3731343283582, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 37436; Mature: 37436
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWPGIIEAYREFMPLKETTKPVTLQEGNTPLIYADRLSEKLGIQLYLKYDGANPTGSF CCCCCHHHHHHHHHCCHHHCCCCEEEECCCCCEEEHHHHHCCCCEEEEEEECCCCCCCCH KDRGMTLAVTKAIEDGSEAIMCASTGNTSAAAAAYGARSGLKTAVVIPEGKIALGKLAQA HHCCEEEEEEEHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH LMHGAEVIPIKGNFDDALAIVKEITSKYPITLVNSLNPYRIEGQKSGAFEVCDQLGNAPD HHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCHHHHHHHHCCCCC VLAIPVGNAGNITAYWKGFKEYYRAKKIESLPRMLGFEAEGSAAIAKNTVISEPETIATA EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHE IRIGNPASWDKAVKAAEESRGLIDYVTDNEIIETYREIASEVGIFAEPASAASVAGVKKM EECCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHH VARSVIKPGSQVVAVLTGHGLKDPTTAIDTIKKPEPVSAEVEAVLEKMGTW HHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKKWPGIIEAYREFMPLKETTKPVTLQEGNTPLIYADRLSEKLGIQLYLKYDGANPTGSF CCCCCHHHHHHHHHCCHHHCCCCEEEECCCCCEEEHHHHHCCCCEEEEEEECCCCCCCCH KDRGMTLAVTKAIEDGSEAIMCASTGNTSAAAAAYGARSGLKTAVVIPEGKIALGKLAQA HHCCEEEEEEEHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH LMHGAEVIPIKGNFDDALAIVKEITSKYPITLVNSLNPYRIEGQKSGAFEVCDQLGNAPD HHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCHHHHHHHHCCCCC VLAIPVGNAGNITAYWKGFKEYYRAKKIESLPRMLGFEAEGSAAIAKNTVISEPETIATA EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHE IRIGNPASWDKAVKAAEESRGLIDYVTDNEIIETYREIASEVGIFAEPASAASVAGVKKM EECCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHH VARSVIKPGSQVVAVLTGHGLKDPTTAIDTIKKPEPVSAEVEAVLEKMGTW HHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3098560; 9384377; 3139660 [H]