| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931643
Identifier: 220931643
GI number: 220931643
Start: 858529
End: 859011
Strand: Direct
Name: 220931643
Synonym: Hore_07990
Alternate gene names: NA
Gene position: 858529-859011 (Clockwise)
Preceding gene: 220931642
Following gene: 220931644
Centisome position: 33.3
GC content: 48.03
Gene sequence:
>483_bases GTGCCTACCGTAGTAGGAGTATTTGATAATAAGGAGCAGGCAGAAAGGGCAGTTGAAGAAATCAGAAATGCCGGAGTGAC TGATGACAAAATATCCATTGTAGCTAAAGAGGATGCTGTTAAAGGTGATAGAAACCAGGAAGGTGCAAACTATACCAATC AGAATCTGACCAGTGGGGTAACTTCTGGTGGAGCCCTTGGAGGTTTAGCCGGGCTTATGGCCGGTGCCGGAGCTCTTACA ATCCCGAGTATTGGACCCATTCTGGCTGTAGGGCCCCTTGCAGCTGGTCTAACAGGAGCAGCAGTTGGAGGAGTTGCCGG TGGACTGGTTGATATGGGGGTTCCCCAGGAGAGGGGAGAATACTATGAAAATGAAGTCAAAAGAGGTTCAATACTGGCAG CCGTCAAAGCCGATCAGGAAGTAGTAAATGATGCTGCATCCTATTTAAGGAAAAATGGTGCCAGGGATGTTGAAACCCAT TAA
Upstream 100 bases:
>100_bases CCAGAGTAATACTGGTAGATTTGAATGAATAAAAGAAAACATATATGTAAATTATATTTTTTAGAACAGGTAAGTTAATT AAAACAAAGGAGGTAATAAA
Downstream 100 bases:
>100_bases AAATTATTAAAGGTTCAGGGTATTAAAGCACCCTTATTATATATAAGGGTGCTTTTTTTATATAACTTTTATTTTTGATA CCTGACCTAATAATATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPTVVGVFDNKEQAERAVEEIRNAGVTDDKISIVAKEDAVKGDRNQEGANYTNQNLTSGVTSGGALGGLAGLMAGAGALT IPSIGPILAVGPLAAGLTGAAVGGVAGGLVDMGVPQERGEYYENEVKRGSILAAVKADQEVVNDAASYLRKNGARDVETH
Sequences:
>Translated_160_residues MPTVVGVFDNKEQAERAVEEIRNAGVTDDKISIVAKEDAVKGDRNQEGANYTNQNLTSGVTSGGALGGLAGLMAGAGALT IPSIGPILAVGPLAAGLTGAAVGGVAGGLVDMGVPQERGEYYENEVKRGSILAAVKADQEVVNDAASYLRKNGARDVETH >Mature_159_residues PTVVGVFDNKEQAERAVEEIRNAGVTDDKISIVAKEDAVKGDRNQEGANYTNQNLTSGVTSGGALGGLAGLMAGAGALTI PSIGPILAVGPLAAGLTGAAVGGVAGGLVDMGVPQERGEYYENEVKRGSILAAVKADQEVVNDAASYLRKNGARDVETH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16234; Mature: 16103
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVVGVFDNKEQAERAVEEIRNAGVTDDKISIVAKEDAVKGDRNQEGANYTNQNLTSGV CCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCC TSGGALGGLAGLMAGAGALTIPSIGPILAVGPLAAGLTGAAVGGVAGGLVDMGVPQERGE CCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHH YYENEVKRGSILAAVKADQEVVNDAASYLRKNGARDVETH HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PTVVGVFDNKEQAERAVEEIRNAGVTDDKISIVAKEDAVKGDRNQEGANYTNQNLTSGV CCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCC TSGGALGGLAGLMAGAGALTIPSIGPILAVGPLAAGLTGAAVGGVAGGLVDMGVPQERGE CCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHH YYENEVKRGSILAAVKADQEVVNDAASYLRKNGARDVETH HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA