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The map label for this gene is dinG [H]

Identifier: 220931636

GI number: 220931636

Start: 851254

End: 853722

Strand: Direct

Name: dinG [H]

Synonym: Hore_07920

Alternate gene names: 220931636

Gene position: 851254-853722 (Clockwise)

Preceding gene: 220931635

Following gene: 220931637

Centisome position: 33.02

GC content: 34.43

Gene sequence:

>2469_bases
GTGACTGTTGAAGAATTGTTTGCTAAATCAATAATAACAAATATTAGACATGACATTCAGGAAGCTGGAGGACAGGAAAT
ATATTTGATCGGGGATATAGATGTTGATACCGGGAAAATAATGGATTATACATTACTGGCCCGTGGTAATCTTAAAATGG
TTCCGGCAATTATTTCAGACCTTAAGCCCGGTCAGGTTATAGTACATAATCATCCTTCATCTGATCTGACTCCATCAGCA
GCTGATATAAGAATAGCTTCACGGATGGGTAATCAGGGTATTGGATTTATTATAATAGATAATGACTTGAATAATGCCTA
TGTAGTCGTTGAACCAAAGATTCCCCATAGGGAAGTTCAGCTGGATATAGATGAAATTATTGAATTTTTTGAGCCCGGGG
GGAGTCTATCCCAATTCCTTAATGATTACGAGTACCGGGAGCAGCAACTGGAGGTTGTCCGGGAAGTAATAAATTCATTT
AATAACCATGAATTTACGCTAATAGAAGCAGGGACCGGAACTGGTAAATCTTTTGCTTATCTGGTACCGGCCTTATTCTG
GGCTAAAAAAAATGAGAAAACTGTAGTGGTCTCTACCAATACTATAAATTTACAGGAACAATTAATCTATAAGGATTTAG
TACTATTGAAAAAAGCCCTTTCCTTTGATTTCAAAGCGGTTATGGTTAAGGGGAGGAGTAATTATATTTGCAAAAGGAAG
ATAAAACACCTTGAACAGGAATTAAATAATTATTTTGATGATGACCCTGAAAAACAGGTTCAGTTTTATAAAGTACTGGA
CTGGCTTGAGGAAAGTAAGTCTGGTAGTAAATCTGAATTAAATTTTGTAGTTGATAATGAAATATGGAATGAAATTGCTT
CAGAAACAGATTTATGCTTACGGACAAATTGTCCCTTTTTTGATACCTGCTATTTCATGAAAGCAAGGAAAGAAGTTTTT
AGTGCAGACATTCTTATTGTAAACCACCATCTTCTTCTGTCAGATATCATGTTGAAGAGTGAATATAGTGAAAGGGATGG
AGGAATATTACCCCGGTATAGTAATTTGATTATTGACGAGGCCCATAATTTTGATGAAATAGCAAGTAGACATCTGGGAC
GTCCTTTTTATTATAAATTGTTACACAAATACTTAAACAAAGTATACTACCCCAAAAATAGATTGTCTTTGATTCCCAGG
ATTAGAAACAGGTTTAGTGCTACTAATTTAAAAAACAAAAAAGAAGTACTTAAAATTATAGATACTGAAATTGTTCCCCA
GGTAAAGAGGGTAGAAGAGCAGAGCCATGAATATTTCCAGAAGTTAAATGAGTTTGTTAATCAAGATGGAGAGGGAGTTA
TAAGACTCACCCAGGATATAATTGAGGGAGAAGCATATAGTAAGATTGTCGATAGTGGGGATACATTACTTGGTAATTTA
AATAATCTCGGCATTTATTTGAATAACCTTTATGAAGAATTTATGACCCTCAATTCATCCGATATCAGTAATTTTGAAGA
ATTAATTATTGAATTGGAGGCTTATATTAATAGATGTCAGCATTTTGCAAAATCACTGGAGTTTAATATAAAAGCAGAGG
AAGAAAATTATGTTTTCTGGATTGAGAAGGATTATAATCTTAATGTTAAACAGGAAAATGCCCCCCTTAAGGTTTCAAAT
ATAATAGATAAGATCTTGTGGGAAACCATGGATAATGTAATATTGACGTCGGCAACATTAACGGTAAATGATAATTTTAA
TTACTTTAAGACAATTCTTGGGATCAATAAATGTAGTCAGTTGAAGATAGAATCACCTTTTAATTATAGTGAGCAGGCTA
CTTTAATTATTTCTGATGATATACCTCCGGCTAATTCTAAAAAGTATTTACCGGTGGCTACCGATATATTAAAAGAAATG
CTACTTTTACTGAGGGGTTCAACGCTGGTTTTATTTACATCCTATAGCATGTTGAACTATTGTACGAAAAAAATTGAGCC
TGTATTAAAAGATGACGGTATCGTTATTCTGCCCCAGGGCCGATATCCCCGAAAGTATATTTTAGAAACTTTTAAAGCCA
ACAGTAACCAGGTAATTTTTGGGACCATGAGTTTCTGGGAAGGTGTTGATATTAAAGGTGATGATCTGAGATATCTGGTA
ATGATGAAATTACCTTTTCCTGTACCCACTGAACCTGTCTCTGCTGCCAGAATGGAACAACTTAAGGAGGAAGGTAAAAA
CCCTTTCACTAATTTTAGTTTACCTAATGCTGTAATCAGGTTTAAACAGGGTTTTGGCCGTCTGATCAGGTCCAGTAAGG
ATACAGGGAAGATTATATGTCTTGATAGTAGAATTAAAACAAAATCTTATGGACGAGTATTCTTGAATTCAATCCCGTCA
GGTTGTCCAGTAAAAGTAATGGATAAAACAGTATTATTACAGGAATTGCATAATTCAAAGGATAAATAA

Upstream 100 bases:

>100_bases
CTTAAAGGACAAACCCTTTATACTGGAAACACCAAAATTTAGTGGTAGAGATAAAGATGTTGAGCTGGTTAATTTATTAC
GGAGGGATTAGTAACTAAAA

Downstream 100 bases:

>100_bases
TATTAAATAAAGGATAATTGGGGAGGTTAGTATGAGTATTAATAATAAATATAAGAAATATTGTCTGATTTCAATACTGA
CATTAGTTTTGTTAATATCG

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 822; Mature: 821

Protein sequence:

>822_residues
MTVEELFAKSIITNIRHDIQEAGGQEIYLIGDIDVDTGKIMDYTLLARGNLKMVPAIISDLKPGQVIVHNHPSSDLTPSA
ADIRIASRMGNQGIGFIIIDNDLNNAYVVVEPKIPHREVQLDIDEIIEFFEPGGSLSQFLNDYEYREQQLEVVREVINSF
NNHEFTLIEAGTGTGKSFAYLVPALFWAKKNEKTVVVSTNTINLQEQLIYKDLVLLKKALSFDFKAVMVKGRSNYICKRK
IKHLEQELNNYFDDDPEKQVQFYKVLDWLEESKSGSKSELNFVVDNEIWNEIASETDLCLRTNCPFFDTCYFMKARKEVF
SADILIVNHHLLLSDIMLKSEYSERDGGILPRYSNLIIDEAHNFDEIASRHLGRPFYYKLLHKYLNKVYYPKNRLSLIPR
IRNRFSATNLKNKKEVLKIIDTEIVPQVKRVEEQSHEYFQKLNEFVNQDGEGVIRLTQDIIEGEAYSKIVDSGDTLLGNL
NNLGIYLNNLYEEFMTLNSSDISNFEELIIELEAYINRCQHFAKSLEFNIKAEEENYVFWIEKDYNLNVKQENAPLKVSN
IIDKILWETMDNVILTSATLTVNDNFNYFKTILGINKCSQLKIESPFNYSEQATLIISDDIPPANSKKYLPVATDILKEM
LLLLRGSTLVLFTSYSMLNYCTKKIEPVLKDDGIVILPQGRYPRKYILETFKANSNQVIFGTMSFWEGVDIKGDDLRYLV
MMKLPFPVPTEPVSAARMEQLKEEGKNPFTNFSLPNAVIRFKQGFGRLIRSSKDTGKIICLDSRIKTKSYGRVFLNSIPS
GCPVKVMDKTVLLQELHNSKDK

Sequences:

>Translated_822_residues
MTVEELFAKSIITNIRHDIQEAGGQEIYLIGDIDVDTGKIMDYTLLARGNLKMVPAIISDLKPGQVIVHNHPSSDLTPSA
ADIRIASRMGNQGIGFIIIDNDLNNAYVVVEPKIPHREVQLDIDEIIEFFEPGGSLSQFLNDYEYREQQLEVVREVINSF
NNHEFTLIEAGTGTGKSFAYLVPALFWAKKNEKTVVVSTNTINLQEQLIYKDLVLLKKALSFDFKAVMVKGRSNYICKRK
IKHLEQELNNYFDDDPEKQVQFYKVLDWLEESKSGSKSELNFVVDNEIWNEIASETDLCLRTNCPFFDTCYFMKARKEVF
SADILIVNHHLLLSDIMLKSEYSERDGGILPRYSNLIIDEAHNFDEIASRHLGRPFYYKLLHKYLNKVYYPKNRLSLIPR
IRNRFSATNLKNKKEVLKIIDTEIVPQVKRVEEQSHEYFQKLNEFVNQDGEGVIRLTQDIIEGEAYSKIVDSGDTLLGNL
NNLGIYLNNLYEEFMTLNSSDISNFEELIIELEAYINRCQHFAKSLEFNIKAEEENYVFWIEKDYNLNVKQENAPLKVSN
IIDKILWETMDNVILTSATLTVNDNFNYFKTILGINKCSQLKIESPFNYSEQATLIISDDIPPANSKKYLPVATDILKEM
LLLLRGSTLVLFTSYSMLNYCTKKIEPVLKDDGIVILPQGRYPRKYILETFKANSNQVIFGTMSFWEGVDIKGDDLRYLV
MMKLPFPVPTEPVSAARMEQLKEEGKNPFTNFSLPNAVIRFKQGFGRLIRSSKDTGKIICLDSRIKTKSYGRVFLNSIPS
GCPVKVMDKTVLLQELHNSKDK
>Mature_821_residues
TVEELFAKSIITNIRHDIQEAGGQEIYLIGDIDVDTGKIMDYTLLARGNLKMVPAIISDLKPGQVIVHNHPSSDLTPSAA
DIRIASRMGNQGIGFIIIDNDLNNAYVVVEPKIPHREVQLDIDEIIEFFEPGGSLSQFLNDYEYREQQLEVVREVINSFN
NHEFTLIEAGTGTGKSFAYLVPALFWAKKNEKTVVVSTNTINLQEQLIYKDLVLLKKALSFDFKAVMVKGRSNYICKRKI
KHLEQELNNYFDDDPEKQVQFYKVLDWLEESKSGSKSELNFVVDNEIWNEIASETDLCLRTNCPFFDTCYFMKARKEVFS
ADILIVNHHLLLSDIMLKSEYSERDGGILPRYSNLIIDEAHNFDEIASRHLGRPFYYKLLHKYLNKVYYPKNRLSLIPRI
RNRFSATNLKNKKEVLKIIDTEIVPQVKRVEEQSHEYFQKLNEFVNQDGEGVIRLTQDIIEGEAYSKIVDSGDTLLGNLN
NLGIYLNNLYEEFMTLNSSDISNFEELIIELEAYINRCQHFAKSLEFNIKAEEENYVFWIEKDYNLNVKQENAPLKVSNI
IDKILWETMDNVILTSATLTVNDNFNYFKTILGINKCSQLKIESPFNYSEQATLIISDDIPPANSKKYLPVATDILKEML
LLLRGSTLVLFTSYSMLNYCTKKIEPVLKDDGIVILPQGRYPRKYILETFKANSNQVIFGTMSFWEGVDIKGDDLRYLVM
MKLPFPVPTEPVSAARMEQLKEEGKNPFTNFSLPNAVIRFKQGFGRLIRSSKDTGKIICLDSRIKTKSYGRVFLNSIPSG
CPVKVMDKTVLLQELHNSKDK

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=702, Percent_Identity=28.9173789173789, Blast_Score=306, Evalue=5e-84,
Organism=Escherichia coli, GI1787018, Length=712, Percent_Identity=27.3876404494382, Blast_Score=223, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 94444; Mature: 94312

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00690 DEAH_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEELFAKSIITNIRHDIQEAGGQEIYLIGDIDVDTGKIMDYTLLARGNLKMVPAIISD
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEHHHHHCC
LKPGQVIVHNHPSSDLTPSAADIRIASRMGNQGIGFIIIDNDLNNAYVVVEPKIPHREVQ
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCEEE
LDIDEIIEFFEPGGSLSQFLNDYEYREQQLEVVREVINSFNNHEFTLIEAGTGTGKSFAY
ECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
LVPALFWAKKNEKTVVVSTNTINLQEQLIYKDLVLLKKALSFDFKAVMVKGRSNYICKRK
HHHHHHHHCCCCCEEEEEECEECHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH
IKHLEQELNNYFDDDPEKQVQFYKVLDWLEESKSGSKSELNFVVDNEIWNEIASETDLCL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCEEE
RTNCPFFDTCYFMKARKEVFSADILIVNHHLLLSDIMLKSEYSERDGGILPRYSNLIIDE
ECCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHCEEEEC
AHNFDEIASRHLGRPFYYKLLHKYLNKVYYPKNRLSLIPRIRNRFSATNLKNKKEVLKII
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DTEIVPQVKRVEEQSHEYFQKLNEFVNQDGEGVIRLTQDIIEGEAYSKIVDSGDTLLGNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHCCCCCEECCC
NNLGIYLNNLYEEFMTLNSSDISNFEELIIELEAYINRCQHFAKSLEFNIKAEEENYVFW
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEE
IEKDYNLNVKQENAPLKVSNIIDKILWETMDNVILTSATLTVNDNFNYFKTILGINKCSQ
EEECCCCCEECCCCCEEHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHCCCCCCC
LKIESPFNYSEQATLIISDDIPPANSKKYLPVATDILKEMLLLLRGSTLVLFTSYSMLNY
EEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
CTKKIEPVLKDDGIVILPQGRYPRKYILETFKANSNQVIFGTMSFWEGVDIKGDDLRYLV
HHHHCCHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCEEEEE
MMKLPFPVPTEPVSAARMEQLKEEGKNPFTNFSLPNAVIRFKQGFGRLIRSSKDTGKIIC
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LDSRIKTKSYGRVFLNSIPSGCPVKVMDKTVLLQELHNSKDK
ECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVEELFAKSIITNIRHDIQEAGGQEIYLIGDIDVDTGKIMDYTLLARGNLKMVPAIISD
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEHHHHHCC
LKPGQVIVHNHPSSDLTPSAADIRIASRMGNQGIGFIIIDNDLNNAYVVVEPKIPHREVQ
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCEEE
LDIDEIIEFFEPGGSLSQFLNDYEYREQQLEVVREVINSFNNHEFTLIEAGTGTGKSFAY
ECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
LVPALFWAKKNEKTVVVSTNTINLQEQLIYKDLVLLKKALSFDFKAVMVKGRSNYICKRK
HHHHHHHHCCCCCEEEEEECEECHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH
IKHLEQELNNYFDDDPEKQVQFYKVLDWLEESKSGSKSELNFVVDNEIWNEIASETDLCL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCEEE
RTNCPFFDTCYFMKARKEVFSADILIVNHHLLLSDIMLKSEYSERDGGILPRYSNLIIDE
ECCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHCEEEEC
AHNFDEIASRHLGRPFYYKLLHKYLNKVYYPKNRLSLIPRIRNRFSATNLKNKKEVLKII
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DTEIVPQVKRVEEQSHEYFQKLNEFVNQDGEGVIRLTQDIIEGEAYSKIVDSGDTLLGNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHCCCCCEECCC
NNLGIYLNNLYEEFMTLNSSDISNFEELIIELEAYINRCQHFAKSLEFNIKAEEENYVFW
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEE
IEKDYNLNVKQENAPLKVSNIIDKILWETMDNVILTSATLTVNDNFNYFKTILGINKCSQ
EEECCCCCEECCCCCEEHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHCCCCCCC
LKIESPFNYSEQATLIISDDIPPANSKKYLPVATDILKEMLLLLRGSTLVLFTSYSMLNY
EEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
CTKKIEPVLKDDGIVILPQGRYPRKYILETFKANSNQVIFGTMSFWEGVDIKGDDLRYLV
HHHHCCHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCEEEEE
MMKLPFPVPTEPVSAARMEQLKEEGKNPFTNFSLPNAVIRFKQGFGRLIRSSKDTGKIIC
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
LDSRIKTKSYGRVFLNSIPSGCPVKVMDKTVLLQELHNSKDK
ECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]