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The map label for this gene is nrnA [H]

Identifier: 220931630

GI number: 220931630

Start: 844662

End: 845636

Strand: Direct

Name: nrnA [H]

Synonym: Hore_07860

Alternate gene names: 220931630

Gene position: 844662-845636 (Clockwise)

Preceding gene: 220931629

Following gene: 220931631

Centisome position: 32.76

GC content: 37.33

Gene sequence:

>975_bases
ATGATAAAATTAACCACAGTAATTGAAGCGATAAAAAAGAGTGATAATTACCTTATTGTTGGCCATGTTGACCCAGATGG
GGATTGTATTGGCTCCATGTTTGCTTTGAAATGGGGCCTTGAACGATTACAAAAAAAAGCCCTGGTCCTCCTGACAGAAC
CCCTTGATAAGATTTATGATTATTTAAATATTTCCAGAGATGATTATTTAATACAGGATGAAGATGATATACAGGGATTA
TCCTGGTCAAACCCTAATATAATTTCTCTGGATACAGGAAGCAAAGAGAGGCTTGGTAATAATAAAGACCTTGTTGATGA
CTATTACACCATTAATATTGACCATCATATAGATAACACTTTATATGGAGACTTGAATTATGTTGATAAGGACTCGGCAG
CTACCGGAGAAATTGTTTACCAGATCCTTGAGAAACTGGGAATCAAAGTAGAAAAAAAGATTGGGACAGCTATAATTACA
GCTCTGGTCGGGGATACCGGGGGTTTTAGTTACCAGAACACAAAACCTGAAATATTGCGGCTCACATCTGATTTAATGGA
ATCAGGGGTTGATTTATATACTGTTAACCGGGCCCTTTTTGCCTCTTATTCCTTTGAATCACTAAAACTAAAGGGTATGG
TTTTTTCTAAAGCCAGGCGTACTTTTGATGGAAGGATTTCATATTTTGTCCTCACACAGGAGATGATTAATAAAAGTGGT
GCTTCTTTTAAGGATACCAGTGGCCTGGTGAATTTCGCAAGGGATATAAAAGGGGTTGAGGTAGGAATTTTATTTCAGGA
AAAATCAGATAACGAAATTAAAGTCAACTTTCGTTCCAATAACTACTGTCCAGTCAATGAAATTGCTGCAGAATTTGGGG
GTGGGGGTCACCCCAGGGCAGCTGGCTGTACTATAAATAATACCCTTGGAAATGCTATAAAAATGGTTTTAAAAAAGGTG
AAGAAATATGTCTAG

Upstream 100 bases:

>100_bases
TTTTCAGGTATGATGATTCACTTGAACATGGTGCCCGTATCAATGAACTTTTAAAAAAGGTTAAGGAGGAAGAAGAATCG
GATAGGGAAGAGGGTTAACA

Downstream 100 bases:

>100_bases
GGTAGATGGTATTATCAGTATAATAAAACCTCCGGGAATGACTTCCTTTGATGTTGTTGCCTGGATCAGGAAAATGTATT
CTGTAAAAAAAGCAGGGCAT

Product: phosphoesterase RecJ domain-containing protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIKLTTVIEAIKKSDNYLIVGHVDPDGDCIGSMFALKWGLERLQKKALVLLTEPLDKIYDYLNISRDDYLIQDEDDIQGL
SWSNPNIISLDTGSKERLGNNKDLVDDYYTINIDHHIDNTLYGDLNYVDKDSAATGEIVYQILEKLGIKVEKKIGTAIIT
ALVGDTGGFSYQNTKPEILRLTSDLMESGVDLYTVNRALFASYSFESLKLKGMVFSKARRTFDGRISYFVLTQEMINKSG
ASFKDTSGLVNFARDIKGVEVGILFQEKSDNEIKVNFRSNNYCPVNEIAAEFGGGGHPRAAGCTINNTLGNAIKMVLKKV
KKYV

Sequences:

>Translated_324_residues
MIKLTTVIEAIKKSDNYLIVGHVDPDGDCIGSMFALKWGLERLQKKALVLLTEPLDKIYDYLNISRDDYLIQDEDDIQGL
SWSNPNIISLDTGSKERLGNNKDLVDDYYTINIDHHIDNTLYGDLNYVDKDSAATGEIVYQILEKLGIKVEKKIGTAIIT
ALVGDTGGFSYQNTKPEILRLTSDLMESGVDLYTVNRALFASYSFESLKLKGMVFSKARRTFDGRISYFVLTQEMINKSG
ASFKDTSGLVNFARDIKGVEVGILFQEKSDNEIKVNFRSNNYCPVNEIAAEFGGGGHPRAAGCTINNTLGNAIKMVLKKV
KKYV
>Mature_324_residues
MIKLTTVIEAIKKSDNYLIVGHVDPDGDCIGSMFALKWGLERLQKKALVLLTEPLDKIYDYLNISRDDYLIQDEDDIQGL
SWSNPNIISLDTGSKERLGNNKDLVDDYYTINIDHHIDNTLYGDLNYVDKDSAATGEIVYQILEKLGIKVEKKIGTAIIT
ALVGDTGGFSYQNTKPEILRLTSDLMESGVDLYTVNRALFASYSFESLKLKGMVFSKARRTFDGRISYFVLTQEMINKSG
ASFKDTSGLVNFARDIKGVEVGILFQEKSDNEIKVNFRSNNYCPVNEIAAEFGGGGHPRAAGCTINNTLGNAIKMVLKKV
KKYV

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 36117; Mature: 36117

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTTVIEAIKKSDNYLIVGHVDPDGDCIGSMFALKWGLERLQKKALVLLTEPLDKIYD
CEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
YLNISRDDYLIQDEDDIQGLSWSNPNIISLDTGSKERLGNNKDLVDDYYTINIDHHIDNT
HHCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCEEEEEEECCCCCE
LYGDLNYVDKDSAATGEIVYQILEKLGIKVEKKIGTAIITALVGDTGGFSYQNTKPEILR
EECCCCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LTSDLMESGVDLYTVNRALFASYSFESLKLKGMVFSKARRTFDGRISYFVLTQEMINKSG
HHHHHHHCCCCEEEECHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEEEEEEEHHHHCCCC
ASFKDTSGLVNFARDIKGVEVGILFQEKSDNEIKVNFRSNNYCPVNEIAAEFGGGGHPRA
CCCCCHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCC
AGCTINNTLGNAIKMVLKKVKKYV
CCCEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLTTVIEAIKKSDNYLIVGHVDPDGDCIGSMFALKWGLERLQKKALVLLTEPLDKIYD
CEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
YLNISRDDYLIQDEDDIQGLSWSNPNIISLDTGSKERLGNNKDLVDDYYTINIDHHIDNT
HHCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCEEEEEEECCCCCE
LYGDLNYVDKDSAATGEIVYQILEKLGIKVEKKIGTAIITALVGDTGGFSYQNTKPEILR
EECCCCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
LTSDLMESGVDLYTVNRALFASYSFESLKLKGMVFSKARRTFDGRISYFVLTQEMINKSG
HHHHHHHCCCCEEEECHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEEEEEEEHHHHCCCC
ASFKDTSGLVNFARDIKGVEVGILFQEKSDNEIKVNFRSNNYCPVNEIAAEFGGGGHPRA
CCCCCHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCC
AGCTINNTLGNAIKMVLKKVKKYV
CCCEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]