Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220931591

Identifier: 220931591

GI number: 220931591

Start: 805333

End: 805539

Strand: Direct

Name: 220931591

Synonym: Hore_07470

Alternate gene names: NA

Gene position: 805333-805539 (Clockwise)

Preceding gene: 220931590

Following gene: 220931593

Centisome position: 31.24

GC content: 37.2

Gene sequence:

>207_bases
ATGAATAAATCATTTACCTGTCCTAAATGCGGCTGTCAGGAGTATGAAAAAGATGAGATAAGGGCAACCGGTGGTGGTTT
CGCTAAAATCTTTGATGTCCAGAATAAAAGGTTTACAGCTATCACCTGTACAAACTGCCGTTATACAGAGTTTTACAAAG
GAGATACGAAAACCCTTATAAATATCCTTGATTTTCTGACAGATTAG

Upstream 100 bases:

>100_bases
TTCCATTTTAAAAAAGTATTTACTTGATAAAAAAATAGTATTTGCCATAGGGATTAATAAGAGTAGAAAACCTGGAGAAA
AAGATGGAAGGAGGAAATAT

Downstream 100 bases:

>100_bases
TTTTTATTCCCCCGATGAATGAAGTGGGGGATTTATTTATTTATTTAACAAACTTATAGCAGTTTTTACAGCAATGTCGG
CATTTTCAGCATAACCATCT

Product: putative nucleic-acid-binding protein containing a Zn-ribbon domain

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNKSFTCPKCGCQEYEKDEIRATGGGFAKIFDVQNKRFTAITCTNCRYTEFYKGDTKTLINILDFLTD

Sequences:

>Translated_68_residues
MNKSFTCPKCGCQEYEKDEIRATGGGFAKIFDVQNKRFTAITCTNCRYTEFYKGDTKTLINILDFLTD
>Mature_68_residues
MNKSFTCPKCGCQEYEKDEIRATGGGFAKIFDVQNKRFTAITCTNCRYTEFYKGDTKTLINILDFLTD

Specific function: Unknown

COG id: COG3478

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7805; Mature: 7805

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSFTCPKCGCQEYEKDEIRATGGGFAKIFDVQNKRFTAITCTNCRYTEFYKGDTKTLI
CCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCCCCCEEECCCHHHHH
NILDFLTD
HHHHHHCC
>Mature Secondary Structure
MNKSFTCPKCGCQEYEKDEIRATGGGFAKIFDVQNKRFTAITCTNCRYTEFYKGDTKTLI
CCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEEEEECCCCCCEEECCCHHHHH
NILDFLTD
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA