| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931593
Identifier: 220931593
GI number: 220931593
Start: 806687
End: 807232
Strand: Direct
Name: 220931593
Synonym: Hore_07490
Alternate gene names: NA
Gene position: 806687-807232 (Clockwise)
Preceding gene: 220931591
Following gene: 220931595
Centisome position: 31.29
GC content: 36.81
Gene sequence:
>546_bases ATGAAAGAATTATCACTGTATGAAGAAATTTTTACTAAACTTGAAGGTGGAGTAAAAAAATTGGACGGGGGTACTGACGA TAGTGAGTTAAACAGTTTTTCACTGAAATTTGAGAGTAGAGTTCCCCAGCTGGAAAGAATGTGTTATATAATGGAGCAGG TTTTATTAAGGAAACCATCCCGGGCCAATGTTTATGCAGGGTTTCAGAAGGTTTCAAGGGCCCGTGATATATGGGATAGA TTTCTTAAAATAGCTGATAATGTTAATAAAGTTTATATATTTGGGGAAAAAGATGATGACCTGCCAAAACACCCTGACAT TGACTTTATCTATCTCCCGGAAGGACATAAGTTGACCCGGGAATGGTTTTTAGTAATAACTAAACCTATTGGAAAAGCAA TGATGGTAGCATATGACCTTGATGGATTTGGTGTCCATGATGATGAAAAACAGAGGAAATTCAAGGGGGCCAAGACCAAT AATCCTGAAATAGTAACAAAAGCCCGGGATTTACTTGAAGAAGTAATAGCTTCATATAATGACTAA
Upstream 100 bases:
>100_bases AATTTACTTGCAAAAACACAGAATGTGATATAAAATGGAAATAACACAAACTGAAATATGTTTGTCATAAATCCCATTAG AAGGGGAGGAGGATATTTAA
Downstream 100 bases:
>100_bases TATATAACAACTATACATAAAATTATATATCAAATATGATGAAAATCGTTAAAGGTATATTCTTTTTAAATATACTTAAA CTTATATAAAATTATCTGAA
Product: putative sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKELSLYEEIFTKLEGGVKKLDGGTDDSELNSFSLKFESRVPQLERMCYIMEQVLLRKPSRANVYAGFQKVSRARDIWDR FLKIADNVNKVYIFGEKDDDLPKHPDIDFIYLPEGHKLTREWFLVITKPIGKAMMVAYDLDGFGVHDDEKQRKFKGAKTN NPEIVTKARDLLEEVIASYND
Sequences:
>Translated_181_residues MKELSLYEEIFTKLEGGVKKLDGGTDDSELNSFSLKFESRVPQLERMCYIMEQVLLRKPSRANVYAGFQKVSRARDIWDR FLKIADNVNKVYIFGEKDDDLPKHPDIDFIYLPEGHKLTREWFLVITKPIGKAMMVAYDLDGFGVHDDEKQRKFKGAKTN NPEIVTKARDLLEEVIASYND >Mature_181_residues MKELSLYEEIFTKLEGGVKKLDGGTDDSELNSFSLKFESRVPQLERMCYIMEQVLLRKPSRANVYAGFQKVSRARDIWDR FLKIADNVNKVYIFGEKDDDLPKHPDIDFIYLPEGHKLTREWFLVITKPIGKAMMVAYDLDGFGVHDDEKQRKFKGAKTN NPEIVTKARDLLEEVIASYND
Specific function: Unknown
COG id: COG4250
COG function: function code T; Predicted sensor protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20985; Mature: 20985
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELSLYEEIFTKLEGGVKKLDGGTDDSELNSFSLKFESRVPQLERMCYIMEQVLLRKPS CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHCCCC RANVYAGFQKVSRARDIWDRFLKIADNVNKVYIFGEKDDDLPKHPDIDFIYLPEGHKLTR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCH EWFLVITKPIGKAMMVAYDLDGFGVHDDEKQRKFKGAKTNNPEIVTKARDLLEEVIASYN HHEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC D C >Mature Secondary Structure MKELSLYEEIFTKLEGGVKKLDGGTDDSELNSFSLKFESRVPQLERMCYIMEQVLLRKPS CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEHHHCCCHHHHHHHHHHHHHHCCCC RANVYAGFQKVSRARDIWDRFLKIADNVNKVYIFGEKDDDLPKHPDIDFIYLPEGHKLTR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCH EWFLVITKPIGKAMMVAYDLDGFGVHDDEKQRKFKGAKTNNPEIVTKARDLLEEVIASYN HHEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA