| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is bvgS [H]
Identifier: 220931586
GI number: 220931586
Start: 799031
End: 800989
Strand: Direct
Name: bvgS [H]
Synonym: Hore_07420
Alternate gene names: 220931586
Gene position: 799031-800989 (Clockwise)
Preceding gene: 220931585
Following gene: 220931587
Centisome position: 30.99
GC content: 29.66
Gene sequence:
>1959_bases ATGATTAAAAGTAAATTTTATGTAGGAGATCTGCCCTTTATACTACTTTTTATCATACTTTTCCTGGCAAGTTTTTATAA CTATATCTTTTTTCACAGTGTAGTTGAACTTTTAACCATAATTACAGCTTCCAATGTATTTATAATTGCTTTTGCCACTA CTGAAATAGGTGAAAATAATTATTTTAAATTTCTTGGTCTTGCCTATGGTTTTGTCGCCTTCTTTGACCTGTTACATATG ACAAGCTGTCAGGGGTTGGGAATATTTCCAGAATATGATATTAATTTATGTATACAATTCTGGATTGTTGCCAGATTGAT TGAAAGTATATCTTTACTGGTTTCTTTTGCTTTTGTTAATAGTAATACTAATAATTTTAAAAAGTATAGATTTTTTATTA GATATATTTTTATATCAGTTCTATTTCTGGTATTATTATTTTATGAATTATTTCCGTTATGTTACCATAATAATTCTCTA ACTAACTTTAAAGTTATTACAGAATATGCAATTTCATTTATTTTACTTTTATCTATAATTGTACTTAAAAAAAGTTCTTC CTGGTTTAGTTCAAGTGTATACAGACTACTCTTTTTGTCACTGGTTTTCACTTTTATGTCAGAGTTATTACTGGCATCAT ATCTTAATCCATACGGGTTTAGAAATATCCTGGGCCATTTGTTTAAACTTGTTTCCTTTTATCTCATATATAAGTCTGTT TCTGTTACCAGTTTAAAGAAACCCTTTGAGACCCTTTTTTATAAGTTAAATCAGGCTAATAAAAAACTAAAAAATGAAAA AAATAAAATACTCGATATTACTGAGGCTATCTTTATTTTTATCGATAAAGAGGGAAAGATAACCCTGATCAATAAAAAAG GTTGTGAGGTCCTGGGTTATCAGGAAGAAGAAATTATTGGAAAGGAATGGGTAACTAATTTTGTTTATAAAGATGACCGA GAGAGAGTAAGAAAAACACTGGAAAATATAGTTACATGTGGATGCAATAACGGAAACAATTTTGAACATCAGGTAGTTAC CAGAGACAATACCAGGCGTACAATTTTATGGAAAAACACTGTTTTAAAAGATGAGCGGGGGCAGATCAGGGGAGTGTTAA GTTCCGGGCTTGATATTACGGATAAAAAATTGCTTGAAGAAGAGCTGGAGTATAATAAACTACGTACTGAGTTTTTTGCC AACCTGTCCCATGAATTTAAAACACCCTTAAATGTAATTTTTTCAGCCCTGCATTTGATTGAATGGTCTTTAGATAAAAA TCCACTGAAGAAAGATAAAATTAAAAGTTATTTAAAAACTATTACTCATAATAGTTATCGACTCTTAAGATTAATTACTA ATTTGTTGGATATTACAAAAATAGACGCTAATTCCTATCAATTAAATATATGTAACTGTGATATTGTCAAAATAGTAAAA TCCGCCGTTAATTCAGTAAAAGGACATATTAATAATAAAACACGGAAAATAGTGTTTAATACAAATGTTAATGAGAAGAT TATAGCCTGTGATCCATTTGATATAGAACGAATTTTATATAATCTTCTCTCAAATGCTATCAAATTTACCGGAGAAGGTG ATAAAATAACTGTAGAAATAAAGGACCGGGGACAATCACTTAATATAATTGTTAAGGATACCGGTATTGGAATACCTGAA GAGATGCAAGACTATATTTTTAAACGTTTTCGCCAGGTTGATAAGTCTTTCAGAAGGAATAATGAAGGTTCGGGTCTTGG TTTGTCATTAACAAAATCACTGGTAGAATTACATGGTGGTAGTATAAGTATAGAAAGCAAACCCGGTAAAGGTAGTACTT TTATTATTAAACTTCCTGTTTTTCAGGTATCAAATAACCTATGCGAAAATACCAGAAAAAAATCCAAAGAGTTAATAGAC AGAATTAATCTGGAATTCTCTGATATTTATGAGTTATAA
Upstream 100 bases:
>100_bases AGGGAACATATTGCAGAAGCAATCCAGTACAGAACTCTTGACCGTAAATTATATTAATTGTTTTAGAGAAGCTGTATTTT TTGCACCGGAGGGGGTTTTT
Downstream 100 bases:
>100_bases TCTAACATAAAATAAAGAAGGTGATTATAATAGAAAACGTAATACCTGCCTTTATAATTACACTATTTGCTGGTCTATCA ACTGGAATCGGGAGTGCTCT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MIKSKFYVGDLPFILLFIILFLASFYNYIFFHSVVELLTIITASNVFIIAFATTEIGENNYFKFLGLAYGFVAFFDLLHM TSCQGLGIFPEYDINLCIQFWIVARLIESISLLVSFAFVNSNTNNFKKYRFFIRYIFISVLFLVLLFYELFPLCYHNNSL TNFKVITEYAISFILLLSIIVLKKSSSWFSSSVYRLLFLSLVFTFMSELLLASYLNPYGFRNILGHLFKLVSFYLIYKSV SVTSLKKPFETLFYKLNQANKKLKNEKNKILDITEAIFIFIDKEGKITLINKKGCEVLGYQEEEIIGKEWVTNFVYKDDR ERVRKTLENIVTCGCNNGNNFEHQVVTRDNTRRTILWKNTVLKDERGQIRGVLSSGLDITDKKLLEEELEYNKLRTEFFA NLSHEFKTPLNVIFSALHLIEWSLDKNPLKKDKIKSYLKTITHNSYRLLRLITNLLDITKIDANSYQLNICNCDIVKIVK SAVNSVKGHINNKTRKIVFNTNVNEKIIACDPFDIERILYNLLSNAIKFTGEGDKITVEIKDRGQSLNIIVKDTGIGIPE EMQDYIFKRFRQVDKSFRRNNEGSGLGLSLTKSLVELHGGSISIESKPGKGSTFIIKLPVFQVSNNLCENTRKKSKELID RINLEFSDIYEL
Sequences:
>Translated_652_residues MIKSKFYVGDLPFILLFIILFLASFYNYIFFHSVVELLTIITASNVFIIAFATTEIGENNYFKFLGLAYGFVAFFDLLHM TSCQGLGIFPEYDINLCIQFWIVARLIESISLLVSFAFVNSNTNNFKKYRFFIRYIFISVLFLVLLFYELFPLCYHNNSL TNFKVITEYAISFILLLSIIVLKKSSSWFSSSVYRLLFLSLVFTFMSELLLASYLNPYGFRNILGHLFKLVSFYLIYKSV SVTSLKKPFETLFYKLNQANKKLKNEKNKILDITEAIFIFIDKEGKITLINKKGCEVLGYQEEEIIGKEWVTNFVYKDDR ERVRKTLENIVTCGCNNGNNFEHQVVTRDNTRRTILWKNTVLKDERGQIRGVLSSGLDITDKKLLEEELEYNKLRTEFFA NLSHEFKTPLNVIFSALHLIEWSLDKNPLKKDKIKSYLKTITHNSYRLLRLITNLLDITKIDANSYQLNICNCDIVKIVK SAVNSVKGHINNKTRKIVFNTNVNEKIIACDPFDIERILYNLLSNAIKFTGEGDKITVEIKDRGQSLNIIVKDTGIGIPE EMQDYIFKRFRQVDKSFRRNNEGSGLGLSLTKSLVELHGGSISIESKPGKGSTFIIKLPVFQVSNNLCENTRKKSKELID RINLEFSDIYEL >Mature_652_residues MIKSKFYVGDLPFILLFIILFLASFYNYIFFHSVVELLTIITASNVFIIAFATTEIGENNYFKFLGLAYGFVAFFDLLHM TSCQGLGIFPEYDINLCIQFWIVARLIESISLLVSFAFVNSNTNNFKKYRFFIRYIFISVLFLVLLFYELFPLCYHNNSL TNFKVITEYAISFILLLSIIVLKKSSSWFSSSVYRLLFLSLVFTFMSELLLASYLNPYGFRNILGHLFKLVSFYLIYKSV SVTSLKKPFETLFYKLNQANKKLKNEKNKILDITEAIFIFIDKEGKITLINKKGCEVLGYQEEEIIGKEWVTNFVYKDDR ERVRKTLENIVTCGCNNGNNFEHQVVTRDNTRRTILWKNTVLKDERGQIRGVLSSGLDITDKKLLEEELEYNKLRTEFFA NLSHEFKTPLNVIFSALHLIEWSLDKNPLKKDKIKSYLKTITHNSYRLLRLITNLLDITKIDANSYQLNICNCDIVKIVK SAVNSVKGHINNKTRKIVFNTNVNEKIIACDPFDIERILYNLLSNAIKFTGEGDKITVEIKDRGQSLNIIVKDTGIGIPE EMQDYIFKRFRQVDKSFRRNNEGSGLGLSLTKSLVELHGGSISIESKPGKGSTFIIKLPVFQVSNNLCENTRKKSKELID RINLEFSDIYEL
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=245, Percent_Identity=33.8775510204082, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1788713, Length=256, Percent_Identity=33.984375, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI145693157, Length=326, Percent_Identity=29.4478527607362, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI48994928, Length=270, Percent_Identity=31.1111111111111, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1786600, Length=442, Percent_Identity=24.8868778280543, Blast_Score=110, Evalue=4e-25, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=28.448275862069, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=28.099173553719, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI87081816, Length=247, Percent_Identity=29.1497975708502, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786783, Length=271, Percent_Identity=28.0442804428044, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI87082128, Length=240, Percent_Identity=29.5833333333333, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788393, Length=241, Percent_Identity=24.0663900414938, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788549, Length=384, Percent_Identity=24.21875, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788279, Length=231, Percent_Identity=30.7359307359307, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=24.5614035087719, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790300, Length=255, Percent_Identity=28.2352941176471, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1790861, Length=208, Percent_Identity=25.9615384615385, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790346, Length=230, Percent_Identity=22.6086956521739, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75462; Mature: 75462
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSKFYVGDLPFILLFIILFLASFYNYIFFHSVVELLTIITASNVFIIAFATTEIGENN CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC YFKFLGLAYGFVAFFDLLHMTSCQGLGIFPEYDINLCIQFWIVARLIESISLLVSFAFVN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SNTNNFKKYRFFIRYIFISVLFLVLLFYELFPLCYHNNSLTNFKVITEYAISFILLLSII CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VLKKSSSWFSSSVYRLLFLSLVFTFMSELLLASYLNPYGFRNILGHLFKLVSFYLIYKSV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SVTSLKKPFETLFYKLNQANKKLKNEKNKILDITEAIFIFIDKEGKITLINKKGCEVLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEECC QEEEIIGKEWVTNFVYKDDRERVRKTLENIVTCGCNNGNNFEHQVVTRDNTRRTILWKNT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCEEEEEECC VLKDERGQIRGVLSSGLDITDKKLLEEELEYNKLRTEFFANLSHEFKTPLNVIFSALHLI CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH EWSLDKNPLKKDKIKSYLKTITHNSYRLLRLITNLLDITKIDANSYQLNICNCDIVKIVK HHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHHHH SAVNSVKGHINNKTRKIVFNTNVNEKIIACDPFDIERILYNLLSNAIKFTGEGDKITVEI HHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCCEEEEEE KDRGQSLNIIVKDTGIGIPEEMQDYIFKRFRQVDKSFRRNNEGSGLGLSLTKSLVELHGG ECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC SISIESKPGKGSTFIIKLPVFQVSNNLCENTRKKSKELIDRINLEFSDIYEL EEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MIKSKFYVGDLPFILLFIILFLASFYNYIFFHSVVELLTIITASNVFIIAFATTEIGENN CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC YFKFLGLAYGFVAFFDLLHMTSCQGLGIFPEYDINLCIQFWIVARLIESISLLVSFAFVN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SNTNNFKKYRFFIRYIFISVLFLVLLFYELFPLCYHNNSLTNFKVITEYAISFILLLSII CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH VLKKSSSWFSSSVYRLLFLSLVFTFMSELLLASYLNPYGFRNILGHLFKLVSFYLIYKSV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SVTSLKKPFETLFYKLNQANKKLKNEKNKILDITEAIFIFIDKEGKITLINKKGCEVLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEECC QEEEIIGKEWVTNFVYKDDRERVRKTLENIVTCGCNNGNNFEHQVVTRDNTRRTILWKNT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCEEEEEECC VLKDERGQIRGVLSSGLDITDKKLLEEELEYNKLRTEFFANLSHEFKTPLNVIFSALHLI CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH EWSLDKNPLKKDKIKSYLKTITHNSYRLLRLITNLLDITKIDANSYQLNICNCDIVKIVK HHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHHHH SAVNSVKGHINNKTRKIVFNTNVNEKIIACDPFDIERILYNLLSNAIKFTGEGDKITVEI HHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCCEEEEEE KDRGQSLNIIVKDTGIGIPEEMQDYIFKRFRQVDKSFRRNNEGSGLGLSLTKSLVELHGG ECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC SISIESKPGKGSTFIIKLPVFQVSNNLCENTRKKSKELIDRINLEFSDIYEL EEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]