| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is zupT [H]
Identifier: 220931587
GI number: 220931587
Start: 801010
End: 801828
Strand: Direct
Name: zupT [H]
Synonym: Hore_07430
Alternate gene names: 220931587
Gene position: 801010-801828 (Clockwise)
Preceding gene: 220931586
Following gene: 220931588
Centisome position: 31.07
GC content: 36.14
Gene sequence:
>819_bases GTGATTATAATAGAAAACGTAATACCTGCCTTTATAATTACACTATTTGCTGGTCTATCAACTGGAATCGGGAGTGCTCT GGCCCTCTTCGCCCGGAGAACTAATACTAAATTTCTTTCGATATCTCTGGGTTTTTCAGCCGGAGTTATGGTTTATGTTT CTTTTGTAGAATTGTTTAATGGAGCCCTGGAAACTTTAATAAAGGTCCATGGTAGTAAAACGGGCCAGATATTAGCGGTT TTATCTTTTTTTACAGGGATATTAATAATTGCCATTATTGACAATATGGTGCCCGAACATGAGAACCCACATCAGGTTAG AAAAGAAAGAGAACTTATAAATATAAAAAAAGAAAATGTTAATAATGATTTTTCATTAAAGAAAATGGGGCTTCTTTCTG CCGTGGCTATATCAATACATAACTTTCCGGAGGGTATAGCAACCTTTGCCTCATCATTGTCAGACCTTACGGTCGGGGTG TCTATTGCTGTTGCTATTGCAATACATAATATTCCGGAAGGTGTTTCGGTATCAGTCCCCATTTATTATGCTACTGGTAA CAAAAAGAAAGCTTTTATATACTCATTCATGTCAGGGTTATCAGAACCTTTAGGAGCTTTAATAGGTTATGCTTTTTTTA AAATATTTTTATCTGATACTGTCCTTGGTATTATTTTCGGACTGGTTGCGGGAATAATGGTATTTATTTCAATAGATGAA CTTCTTCCAGCTTCAAGAAGGTATGGTCAGGGTCATCAGGAGATATACAGCTTCATAGCAGGTATGGCTGTAATGGCCAT AAGTTTACTGTTATTATAA
Upstream 100 bases:
>100_bases TATGCGAAAATACCAGAAAAAAATCCAAAGAGTTAATAGACAGAATTAATCTGGAATTCTCTGATATTTATGAGTTATAA TCTAACATAAAATAAAGAAG
Downstream 100 bases:
>100_bases AAAATTTTATAAATACAAATGTTATAAATATCTGGGTTTTTTCCATGACTGTGGAGAAAACCTTTTTTGTTTACTTTTTA GTACTTTTTTCTCTAAAATG
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIIIENVIPAFIITLFAGLSTGIGSALALFARRTNTKFLSISLGFSAGVMVYVSFVELFNGALETLIKVHGSKTGQILAV LSFFTGILIIAIIDNMVPEHENPHQVRKERELINIKKENVNNDFSLKKMGLLSAVAISIHNFPEGIATFASSLSDLTVGV SIAVAIAIHNIPEGVSVSVPIYYATGNKKKAFIYSFMSGLSEPLGALIGYAFFKIFLSDTVLGIIFGLVAGIMVFISIDE LLPASRRYGQGHQEIYSFIAGMAVMAISLLLL
Sequences:
>Translated_272_residues MIIIENVIPAFIITLFAGLSTGIGSALALFARRTNTKFLSISLGFSAGVMVYVSFVELFNGALETLIKVHGSKTGQILAV LSFFTGILIIAIIDNMVPEHENPHQVRKERELINIKKENVNNDFSLKKMGLLSAVAISIHNFPEGIATFASSLSDLTVGV SIAVAIAIHNIPEGVSVSVPIYYATGNKKKAFIYSFMSGLSEPLGALIGYAFFKIFLSDTVLGIIFGLVAGIMVFISIDE LLPASRRYGQGHQEIYSFIAGMAVMAISLLLL >Mature_272_residues MIIIENVIPAFIITLFAGLSTGIGSALALFARRTNTKFLSISLGFSAGVMVYVSFVELFNGALETLIKVHGSKTGQILAV LSFFTGILIIAIIDNMVPEHENPHQVRKERELINIKKENVNNDFSLKKMGLLSAVAISIHNFPEGIATFASSLSDLTVGV SIAVAIAIHNIPEGVSVSVPIYYATGNKKKAFIYSFMSGLSEPLGALIGYAFFKIFLSDTVLGIIFGLVAGIMVFISIDE LLPASRRYGQGHQEIYSFIAGMAVMAISLLLL
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI229577418, Length=323, Percent_Identity=26.0061919504644, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI229577422, Length=331, Percent_Identity=25.0755287009063, Blast_Score=81, Evalue=8e-16, Organism=Escherichia coli, GI1789419, Length=262, Percent_Identity=36.2595419847328, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17507805, Length=313, Percent_Identity=26.8370607028754, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24652846, Length=189, Percent_Identity=26.984126984127, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 29293; Mature: 29293
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIENVIPAFIITLFAGLSTGIGSALALFARRTNTKFLSISLGFSAGVMVYVSFVELFN CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH GALETLIKVHGSKTGQILAVLSFFTGILIIAIIDNMVPEHENPHQVRKERELINIKKENV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC NNDFSLKKMGLLSAVAISIHNFPEGIATFASSLSDLTVGVSIAVAIAIHNIPEGVSVSVP CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE IYYATGNKKKAFIYSFMSGLSEPLGALIGYAFFKIFLSDTVLGIIFGLVAGIMVFISIDE EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPASRRYGQGHQEIYSFIAGMAVMAISLLLL HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIIIENVIPAFIITLFAGLSTGIGSALALFARRTNTKFLSISLGFSAGVMVYVSFVELFN CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH GALETLIKVHGSKTGQILAVLSFFTGILIIAIIDNMVPEHENPHQVRKERELINIKKENV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC NNDFSLKKMGLLSAVAISIHNFPEGIATFASSLSDLTVGVSIAVAIAIHNIPEGVSVSVP CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE IYYATGNKKKAFIYSFMSGLSEPLGALIGYAFFKIFLSDTVLGIIFGLVAGIMVFISIDE EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPASRRYGQGHQEIYSFIAGMAVMAISLLLL HCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA