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The map label for this gene is 220931572

Identifier: 220931572

GI number: 220931572

Start: 788914

End: 789330

Strand: Direct

Name: 220931572

Synonym: Hore_07280

Alternate gene names: NA

Gene position: 788914-789330 (Clockwise)

Preceding gene: 220931571

Following gene: 220931573

Centisome position: 30.6

GC content: 34.05

Gene sequence:

>417_bases
TTGACATCGGGATTAAATTATAGTAAACTATCATCTGTAAAGTTTTTATACTTAACACAGTTGGTGATTTGTTTGCTTGA
AAAAGTTATTGAAATGGGAATGTTATTTGATTTTTATGGTAAGCTTTTAACAGATAGGCAGCAGGAGGTAATATACCTTT
ATTATTATCGAGACCTTTCCCTGGGAGAGATAGCTGAACAACTTGATATTAGCAGGCAGGGAGTCTATGACCATATCCAC
CGGGGAGAAGAGGTCCTGAAAAGCTATGAACAGAAACTGGGACTGGTCAGCAAATATAAAAGGTTAAAAAAAGAACTCGA
TGGTCTTTCCCGGTATATCAGTGATAACAAAAATATAAATAAAACTGTTAAAAAGGATTTACTGTGCAGAATAGATAAAA
TTTCAAAAGAGGTCTAA

Upstream 100 bases:

>100_bases
CAGGATTTTAAACCGGACAGGTTTGTTGAGGCCTTGTTTAACGACTAATATTAATTAACTTTAAGCCTCCTGTATGGAGG
CTTTTTTTAACGGGAAAGCC

Downstream 100 bases:

>100_bases
GGGAGGAAAATTTAATGATTTTTGAAGGTCTGGCCAGCAAACTTCAGGCAACCCTGAAAAAACTGAGGAATAAAGGGAAA
TTAAGTGGAAAAGATGTTAA

Product: putative helix-turn-helix protein YlxM/p13 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTSGLNYSKLSSVKFLYLTQLVICLLEKVIEMGMLFDFYGKLLTDRQQEVIYLYYYRDLSLGEIAEQLDISRQGVYDHIH
RGEEVLKSYEQKLGLVSKYKRLKKELDGLSRYISDNKNINKTVKKDLLCRIDKISKEV

Sequences:

>Translated_138_residues
MTSGLNYSKLSSVKFLYLTQLVICLLEKVIEMGMLFDFYGKLLTDRQQEVIYLYYYRDLSLGEIAEQLDISRQGVYDHIH
RGEEVLKSYEQKLGLVSKYKRLKKELDGLSRYISDNKNINKTVKKDLLCRIDKISKEV
>Mature_137_residues
TSGLNYSKLSSVKFLYLTQLVICLLEKVIEMGMLFDFYGKLLTDRQQEVIYLYYYRDLSLGEIAEQLDISRQGVYDHIHR
GEEVLKSYEQKLGLVSKYKRLKKELDGLSRYISDNKNINKTVKKDLLCRIDKISKEV

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein [H]

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04297 UPF0122 [H]

EC number: NA

Molecular weight: Translated: 16228; Mature: 16097

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGLNYSKLSSVKFLYLTQLVICLLEKVIEMGMLFDFYGKLLTDRQQEVIYLYYYRDLS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCC
LGEIAEQLDISRQGVYDHIHRGEEVLKSYEQKLGLVSKYKRLKKELDGLSRYISDNKNIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KTVKKDLLCRIDKISKEV
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSGLNYSKLSSVKFLYLTQLVICLLEKVIEMGMLFDFYGKLLTDRQQEVIYLYYYRDLS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCC
LGEIAEQLDISRQGVYDHIHRGEEVLKSYEQKLGLVSKYKRLKKELDGLSRYISDNKNIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KTVKKDLLCRIDKISKEV
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA