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The map label for this gene is ftsY [H]

Identifier: 220931571

GI number: 220931571

Start: 787893

End: 788861

Strand: Direct

Name: ftsY [H]

Synonym: Hore_07270

Alternate gene names: 220931571

Gene position: 787893-788861 (Clockwise)

Preceding gene: 220931570

Following gene: 220931572

Centisome position: 30.56

GC content: 40.56

Gene sequence:

>969_bases
ATGTTAAATATGTTCAAAAAAAACAAAGAAGCAAAAACAGAAAATAATGATGAAAAAGAAGGATTATTTTCACGTCTTAA
GGGAGGTCTCGATAAAACCAGGTCAGGGTTTATTCAGAAAGTTACTGGACTTTTTACTTCAAGAGGAAAAATTGATGATG
AGTTATTTGAAGACCTGGAAGAGATATTGATTCAATCCGATGTCGGGGTTAAAACTACCATGAAACTGGTCGAAGAACTT
GAAGAAATAACTGAGGAGAAGAAGATAACTGAACCTGAGCAATTGATTGACATTTTCAACGAAGAGCTCAGGCAAATACT
GGAATCTGATGATAACGGGCTTGAGCTTGAGGATGGTTTAAATATTTTAATGGTTGTTGGTGTTAATGGAGCTGGAAAGA
CTACTACCATTGCTAAAATAGCACAGAGATTTAAAAATGAAGGAAAGAAAGTTATGCTGGCAGCCGGGGATACTTTCAGG
GCCGCAGCTATAGATCAGTTAAAGACCTGGGGTGATAGAATAGGTGTTAAAACCATTGCCCAGGCTGAAGGAGCTGATGC
TGCTGCCGTTGCCTTTGATGCTATTCAATCTGCCAGGGCCAGAGGAGTAGATCTTTTAATAGTTGATACAGCCGGAAGGC
TTCATACCCAGAAGAATTTAATGGAAGAATTAAAAAAGGTCAGGAGAGTTATTGAACGTGAGGGGAAAGGTGCCAATATT
GAAGTTCTCCTGGTTCTTGATGCTACAACAGGTCAAAATGCTATTAACCAGGCTCGCCTTTTCAATGAAGCGGTTCAGGT
TGATGGCATTGCCCTGACAAAACTGGATGGGACAGCAAAAGGTGGTATAGTGATCGCGGTTAAGAATGAACTGGGGATTC
CCATTAAGTTAATTGGAGTTGGTGAAAGGGCCGAAGACCTGCAGGATTTTAAACCGGACAGGTTTGTTGAGGCCTTGTTT
AACGACTAA

Upstream 100 bases:

>100_bases
GAAGCAGAAATCAGGCTCCGGAAACGGAGGTATGAAATTGCCAAGGAATTTACTGACCTTTGTACCAGTATTATAATTAA
GTAAGGGGGTAGTTGAGTGG

Downstream 100 bases:

>100_bases
TATTAATTAACTTTAAGCCTCCTGTATGGAGGCTTTTTTTAACGGGAAAGCCTTGACATCGGGATTAAATTATAGTAAAC
TATCATCTGTAAAGTTTTTA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MLNMFKKNKEAKTENNDEKEGLFSRLKGGLDKTRSGFIQKVTGLFTSRGKIDDELFEDLEEILIQSDVGVKTTMKLVEEL
EEITEEKKITEPEQLIDIFNEELRQILESDDNGLELEDGLNILMVVGVNGAGKTTTIAKIAQRFKNEGKKVMLAAGDTFR
AAAIDQLKTWGDRIGVKTIAQAEGADAAAVAFDAIQSARARGVDLLIVDTAGRLHTQKNLMEELKKVRRVIEREGKGANI
EVLLVLDATTGQNAINQARLFNEAVQVDGIALTKLDGTAKGGIVIAVKNELGIPIKLIGVGERAEDLQDFKPDRFVEALF
ND

Sequences:

>Translated_322_residues
MLNMFKKNKEAKTENNDEKEGLFSRLKGGLDKTRSGFIQKVTGLFTSRGKIDDELFEDLEEILIQSDVGVKTTMKLVEEL
EEITEEKKITEPEQLIDIFNEELRQILESDDNGLELEDGLNILMVVGVNGAGKTTTIAKIAQRFKNEGKKVMLAAGDTFR
AAAIDQLKTWGDRIGVKTIAQAEGADAAAVAFDAIQSARARGVDLLIVDTAGRLHTQKNLMEELKKVRRVIEREGKGANI
EVLLVLDATTGQNAINQARLFNEAVQVDGIALTKLDGTAKGGIVIAVKNELGIPIKLIGVGERAEDLQDFKPDRFVEALF
ND
>Mature_322_residues
MLNMFKKNKEAKTENNDEKEGLFSRLKGGLDKTRSGFIQKVTGLFTSRGKIDDELFEDLEEILIQSDVGVKTTMKLVEEL
EEITEEKKITEPEQLIDIFNEELRQILESDDNGLELEDGLNILMVVGVNGAGKTTTIAKIAQRFKNEGKKVMLAAGDTFR
AAAIDQLKTWGDRIGVKTIAQAEGADAAAVAFDAIQSARARGVDLLIVDTAGRLHTQKNLMEELKKVRRVIEREGKGANI
EVLLVLDATTGQNAINQARLFNEAVQVDGIALTKLDGTAKGGIVIAVKNELGIPIKLIGVGERAEDLQDFKPDRFVEALF
ND

Specific function: Required for normal cell growth and morphogenesis; translocation of at least 1 protein is impaired in its absence [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=34, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI4507215, Length=200, Percent_Identity=34, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI23308697, Length=307, Percent_Identity=29.9674267100977, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI295424842, Length=307, Percent_Identity=29.9674267100977, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1789874, Length=315, Percent_Identity=53.3333333333333, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1788963, Length=286, Percent_Identity=32.8671328671329, Blast_Score=161, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17539958, Length=279, Percent_Identity=30.8243727598566, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=284, Percent_Identity=32.3943661971831, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=200, Percent_Identity=38, Blast_Score=138, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=221, Percent_Identity=28.0542986425339, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17647949, Length=200, Percent_Identity=34.5, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24641198, Length=265, Percent_Identity=32.4528301886792, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 35366; Mature: 35366

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNMFKKNKEAKTENNDEKEGLFSRLKGGLDKTRSGFIQKVTGLFTSRGKIDDELFEDLE
CCCCHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
EILIQSDVGVKTTMKLVEELEEITEEKKITEPEQLIDIFNEELRQILESDDNGLELEDGL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NILMVVGVNGAGKTTTIAKIAQRFKNEGKKVMLAAGDTFRAAAIDQLKTWGDRIGVKTIA
CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHHH
QAEGADAAAVAFDAIQSARARGVDLLIVDTAGRLHTQKNLMEELKKVRRVIEREGKGANI
HCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
EVLLVLDATTGQNAINQARLFNEAVQVDGIALTKLDGTAKGGIVIAVKNELGIPIKLIGV
EEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEC
GERAEDLQDFKPDRFVEALFND
CCHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MLNMFKKNKEAKTENNDEKEGLFSRLKGGLDKTRSGFIQKVTGLFTSRGKIDDELFEDLE
CCCCHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
EILIQSDVGVKTTMKLVEELEEITEEKKITEPEQLIDIFNEELRQILESDDNGLELEDGL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NILMVVGVNGAGKTTTIAKIAQRFKNEGKKVMLAAGDTFRAAAIDQLKTWGDRIGVKTIA
CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHHH
QAEGADAAAVAFDAIQSARARGVDLLIVDTAGRLHTQKNLMEELKKVRRVIEREGKGANI
HCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
EVLLVLDATTGQNAINQARLFNEAVQVDGIALTKLDGTAKGGIVIAVKNELGIPIKLIGV
EEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEC
GERAEDLQDFKPDRFVEALFND
CCHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584053; 9384377; 8654983 [H]