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The map label for this gene is scpA

Identifier: 220931561

GI number: 220931561

Start: 776859

End: 777590

Strand: Direct

Name: scpA

Synonym: Hore_07170

Alternate gene names: 220931561

Gene position: 776859-777590 (Clockwise)

Preceding gene: 220931560

Following gene: 220931562

Centisome position: 30.13

GC content: 35.93

Gene sequence:

>732_bases
ATGTACGAAGTTCAGCTGGACAAATTTCAGGGTCCTCTGGAATTGCTTTATCAGCTTGTAAAAAAAAATAAAATTGAAAT
CAGTGAGATATCTCTGGCCCGGATTACCGAACAGTATCTGGAATACATAGAACACTACCGTGACTTCAACCTGGAGATGG
CCAGTGAATTTATGGTTATAGCTTCAGAATTAATAGAGTTAAAGGTAAAAAGCCTTCTTCCTGACAGTGAGGAAGATTCT
ACAGAAGAGGAGAAAGGCAAGACCATCGTTCAGAGGTTAAAGGATTATCATGTATTTAAAAAAGTTACCGAACTATTCAG
GGAGTATGAAAAGGCTGCCGGGCAAATATATTCAAAACCGGTTAATCTCGATAAATATGTTGATAATGAGGTAAATTATG
AGATTGATATAGATATATCTGAGCTGGTAGAAGCCTTTAAAAAAGCTATGTCCTCTACTGACGGGGTTGAGGTTTTTGAA
GGTGACAGGAACCTTAAAAAAATAGAATCAGAGGAAATAAAGATACAGGATAAAATGGACCAAATTCTTGAATTATTTAA
CCAGAATCCAGATCAGGGATTAACCTTTTCCCAGTTGGTAAGTGGTAATCCAAGTAAAATGGAAATTGTGGTTACATTTC
TCAGTATTCTGGAGCTAACCAAGTTAAGGAAAATAGAAATAAAGCAGGAAAAATTATTCTCTGATATAAATCTAAGGTCA
AAAGCAGGGTAG

Upstream 100 bases:

>100_bases
TATTTTTAATTCGGGGCCTATGATTGTTTTTTTCGGCCACAAAATTGATAAATTAATATATATTTTTACCTTGATGGAAA
AAGCTTTGGGGGTATAACAT

Downstream 100 bases:

>100_bases
GTGGTATTATGGATGTTGGAAATCTGGCAAAGCTGGAGGCATTATTGTTTACATCACCGGAACCGGTCTCCCCGGGAGAG
ATAGCCCGGGCTGCAGATAT

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MYEVQLDKFQGPLELLYQLVKKNKIEISEISLARITEQYLEYIEHYRDFNLEMASEFMVIASELIELKVKSLLPDSEEDS
TEEEKGKTIVQRLKDYHVFKKVTELFREYEKAAGQIYSKPVNLDKYVDNEVNYEIDIDISELVEAFKKAMSSTDGVEVFE
GDRNLKKIESEEIKIQDKMDQILELFNQNPDQGLTFSQLVSGNPSKMEIVVTFLSILELTKLRKIEIKQEKLFSDINLRS
KAG

Sequences:

>Translated_243_residues
MYEVQLDKFQGPLELLYQLVKKNKIEISEISLARITEQYLEYIEHYRDFNLEMASEFMVIASELIELKVKSLLPDSEEDS
TEEEKGKTIVQRLKDYHVFKKVTELFREYEKAAGQIYSKPVNLDKYVDNEVNYEIDIDISELVEAFKKAMSSTDGVEVFE
GDRNLKKIESEEIKIQDKMDQILELFNQNPDQGLTFSQLVSGNPSKMEIVVTFLSILELTKLRKIEIKQEKLFSDINLRS
KAG
>Mature_243_residues
MYEVQLDKFQGPLELLYQLVKKNKIEISEISLARITEQYLEYIEHYRDFNLEMASEFMVIASELIELKVKSLLPDSEEDS
TEEEKGKTIVQRLKDYHVFKKVTELFREYEKAAGQIYSKPVNLDKYVDNEVNYEIDIDISELVEAFKKAMSSTDGVEVFE
GDRNLKKIESEEIKIQDKMDQILELFNQNPDQGLTFSQLVSGNPSKMEIVVTFLSILELTKLRKIEIKQEKLFSDINLRS
KAG

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_HALOH (B8CW05)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002508469.1
- GeneID:   7312952
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_07170
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 28327; Mature: 28327

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEVQLDKFQGPLELLYQLVKKNKIEISEISLARITEQYLEYIEHYRDFNLEMASEFMVI
CCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASELIELKVKSLLPDSEEDSTEEEKGKTIVQRLKDYHVFKKVTELFREYEKAAGQIYSKP
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VNLDKYVDNEVNYEIDIDISELVEAFKKAMSSTDGVEVFEGDRNLKKIESEEIKIQDKMD
CCHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
QILELFNQNPDQGLTFSQLVSGNPSKMEIVVTFLSILELTKLRKIEIKQEKLFSDINLRS
HHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAG
CCC
>Mature Secondary Structure
MYEVQLDKFQGPLELLYQLVKKNKIEISEISLARITEQYLEYIEHYRDFNLEMASEFMVI
CCCCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASELIELKVKSLLPDSEEDSTEEEKGKTIVQRLKDYHVFKKVTELFREYEKAAGQIYSKP
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VNLDKYVDNEVNYEIDIDISELVEAFKKAMSSTDGVEVFEGDRNLKKIESEEIKIQDKMD
CCHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
QILELFNQNPDQGLTFSQLVSGNPSKMEIVVTFLSILELTKLRKIEIKQEKLFSDINLRS
HHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA