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The map label for this gene is ywhC [H]

Identifier: 220931560

GI number: 220931560

Start: 776111

End: 776767

Strand: Direct

Name: ywhC [H]

Synonym: Hore_07160

Alternate gene names: 220931560

Gene position: 776111-776767 (Clockwise)

Preceding gene: 220931559

Following gene: 220931561

Centisome position: 30.1

GC content: 37.75

Gene sequence:

>657_bases
ATGAATTTAGAAGAAATTGTATTGTTAATCCCGGTTATTTTGCTATCTTTATCTATCCATGAATATTCGCATGGCAGGGT
ATCATACCTGTTAGGAGACCCTACACCTAAGTTAATGGGACGTTTAACGTTGAATCCCCTGGCTCATCTGGATTTGGTGG
GTAGTCTTGTCTTAATTCTAACCAGGAGGTTTGGCTGGGCTAAACCTGTCCCGGTTAACCCCAGATATTATAAAAATCCG
AGGAAGGGTTTGATGCTGGTGGGGCTGGCCGGCCCTTTTGCAAATATATTTCTGGCTGTGTTATTCGCTCTATTTTTTAA
AGTTTTTTTAAGTATAGCTGGAATTACTATACATAAAACAGGTTTATATTATACCTTAAGTGGTAATGTTAATGAAATAA
CTGCAACCTTAATAGATTTTATAATCCTGGCCGGGGTAGTAAATTTAAGTCTGGCTGTTTTTAATTTAATACCCATTCCC
CCCCTTGATGGCTCGAAAATCCTGAGAGGTTTTACCCCTCCTTCTTTTGACAGGTTCCTTTTACAGCTCGAAGGACCCCT
GGGCATGGTAATTATATTTGCTCTGGCCTATCTGGGTATATTGAGGATAATCCTTATACCCATTGTAAATCTTATTTTTA
ATTTATTATATTTTTAA

Upstream 100 bases:

>100_bases
TGGGAGGCTAAAGTGGATAATGGCTTAAAAACAAGAGAGGAAGAACTTAGATTTGCCAGAAAAATTATTGGTGATAAACT
AAAGTGAGGTAAAACAGATT

Downstream 100 bases:

>100_bases
TTCGGGGCCTATGATTGTTTTTTTCGGCCACAAAATTGATAAATTAATATATATTTTTACCTTGATGGAAAAAGCTTTGG
GGGTATAACATATGTACGAA

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNLEEIVLLIPVILLSLSIHEYSHGRVSYLLGDPTPKLMGRLTLNPLAHLDLVGSLVLILTRRFGWAKPVPVNPRYYKNP
RKGLMLVGLAGPFANIFLAVLFALFFKVFLSIAGITIHKTGLYYTLSGNVNEITATLIDFIILAGVVNLSLAVFNLIPIP
PLDGSKILRGFTPPSFDRFLLQLEGPLGMVIIFALAYLGILRIILIPIVNLIFNLLYF

Sequences:

>Translated_218_residues
MNLEEIVLLIPVILLSLSIHEYSHGRVSYLLGDPTPKLMGRLTLNPLAHLDLVGSLVLILTRRFGWAKPVPVNPRYYKNP
RKGLMLVGLAGPFANIFLAVLFALFFKVFLSIAGITIHKTGLYYTLSGNVNEITATLIDFIILAGVVNLSLAVFNLIPIP
PLDGSKILRGFTPPSFDRFLLQLEGPLGMVIIFALAYLGILRIILIPIVNLIFNLLYF
>Mature_218_residues
MNLEEIVLLIPVILLSLSIHEYSHGRVSYLLGDPTPKLMGRLTLNPLAHLDLVGSLVLILTRRFGWAKPVPVNPRYYKNP
RKGLMLVGLAGPFANIFLAVLFALFFKVFLSIAGITIHKTGLYYTLSGNVNEITATLIDFIILAGVVNLSLAVFNLIPIP
PLDGSKILRGFTPPSFDRFLLQLEGPLGMVIIFALAYLGILRIILIPIVNLIFNLLYF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24137; Mature: 24137

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEEIVLLIPVILLSLSIHEYSHGRVSYLLGDPTPKLMGRLTLNPLAHLDLVGSLVLIL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
TRRFGWAKPVPVNPRYYKNPRKGLMLVGLAGPFANIFLAVLFALFFKVFLSIAGITIHKT
HHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
GLYYTLSGNVNEITATLIDFIILAGVVNLSLAVFNLIPIPPLDGSKILRGFTPPSFDRFL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHH
LQLEGPLGMVIIFALAYLGILRIILIPIVNLIFNLLYF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLEEIVLLIPVILLSLSIHEYSHGRVSYLLGDPTPKLMGRLTLNPLAHLDLVGSLVLIL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
TRRFGWAKPVPVNPRYYKNPRKGLMLVGLAGPFANIFLAVLFALFFKVFLSIAGITIHKT
HHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
GLYYTLSGNVNEITATLIDFIILAGVVNLSLAVFNLIPIPPLDGSKILRGFTPPSFDRFL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHH
LQLEGPLGMVIIFALAYLGILRIILIPIVNLIFNLLYF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]