The gene/protein map for NC_011899 is currently unavailable.
Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is spoVAD [H]

Identifier: 220931550

GI number: 220931550

Start: 763094

End: 764125

Strand: Direct

Name: spoVAD [H]

Synonym: Hore_07060

Alternate gene names: 220931550

Gene position: 763094-764125 (Clockwise)

Preceding gene: 220931549

Following gene: 220931551

Centisome position: 29.6

GC content: 45.64

Gene sequence:

>1032_bases
ATGGCTCAAAAGTTCAATGGACAGACCCTTACCTTTCAAAACCCTCCACATATCATAAGCCATGGATCTGTGGTGGGGCC
AGAAGAAAAAAAAGGCCCACTGGGTAAAAACTTTGATTTGACATATGAAGATGCTAAATGTGGAGAGAAGACCTGGGAGA
AGGGTGAAAAAAAGATGGTGTCAGATTCGGTTAATCTGGCCCTGCAGAAAGCAAATCTGACCACATCTGATATTGATATT
ATTCTCGGTGGTGACCTCTTAAACCAGTTGATTACCGCCAATTTTGTGGCCCGGGATTATGATGTTCCCTATCTGGGTTT
ATATGGAGCCTGTTCTACCATGGTTCAGGCCCTGGGCCTGGGTGCGGCTTTAATTGATGGCAGTTACGCAGATTGTGTTC
TGGGATACTGTTCCAGTCACTACCAGACAGCCGAGCGTCAGTACAGGAATCCCCTGGAGTATGGGGTTCAGTATCCACCA
TATAAGCAATGGACGGTAACCGGGGCCGGGTCATACATCCTGGGGCGGGTCGGCGGATCTACCTGGATTACCCATGCGAC
TTTTGGAAAAGTAATGGATCTGGGACAAAAGGATGCCAATGATATGGGTGGGGCCATGGCGCCAGCAGCGGCTGACACCC
TGATACAGCACTTTAAAGATCTGAACAGGGGTCCTCAGGATTATGACCTTATTTTGACAGGTGACCTGGGGAGAACGGGG
AGAAAAATTCTTGATTCCCTGCTTGTAGAAAAAAATATAAATTTAGGTGAAAAGCTTCAGGACTGTGGGGCAATGCTATT
AACTGATGAGAAAAAGTATGGTTCCGGTGGGAGTGGTTGTGCTGCTTCAGCAGTAGTTGTAGGAAGTGTAATTATACCTA
AAATTATAAATGCTGATATAAATAGAATTATAATTATCGGGACCGGGGCTTTGCTCAGTTCTCTAACCGTAAAACAGGGG
GAATCGATTCCTAGTGTTGCCCATGCGGTTGTCATAGAAAAAATTCCAGGTGGTGAAAACAATAATGGGTAA

Upstream 100 bases:

>100_bases
CTGGGGGCCAAGTTGTTTACAGTTGCCGGACCTGTATTAACCTACGGAATGGTTTCTGCTTTTATAATAGGTTTACTCAA
AGTAATCATGGGGGGATAAT

Downstream 100 bases:

>100_bases
CTATTTGACAGCATTTTTTGTAGGTGGTTTAATATGTGCCCTGGGGCAGATTTTCCTTGATAACACTAAATATACGCCAG
CTCATCTATTGGTTGGGCTG

Product: stage V sporulation protein AD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMVSDSVNLALQKANLTTSDIDI
ILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGLGAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPP
YKQWTVTGAGSYILGRVGGSTWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG
RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADINRIIIIGTGALLSSLTVKQG
ESIPSVAHAVVIEKIPGGENNNG

Sequences:

>Translated_343_residues
MAQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMVSDSVNLALQKANLTTSDIDI
ILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGLGAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPP
YKQWTVTGAGSYILGRVGGSTWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG
RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADINRIIIIGTGALLSSLTVKQG
ESIPSVAHAVVIEKIPGGENNNG
>Mature_342_residues
AQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMVSDSVNLALQKANLTTSDIDII
LGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGLGAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPPY
KQWTVTGAGSYILGRVGGSTWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTGR
KILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADINRIIIIGTGALLSSLTVKQGE
SIPSVAHAVVIEKIPGGENNNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010894
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF07451 SpoVAD [H]

EC number: NA

Molecular weight: Translated: 36546; Mature: 36415

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMV
CCCCCCCCEEEECCCCCEECCCCEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
SDSVNLALQKANLTTSDIDIILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGL
HHHHHEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
GAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPPYKQWTVTGAGSYILGRVGGS
CHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCEEEEECCCC
TWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG
EEEEHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADI
HHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
NRIIIIGTGALLSSLTVKQGESIPSVAHAVVIEKIPGGENNNG
CEEEEEECHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure 
AQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMV
CCCCCCCEEEECCCCCEECCCCEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
SDSVNLALQKANLTTSDIDIILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGL
HHHHHEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
GAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPPYKQWTVTGAGSYILGRVGGS
CHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCEEEEECCCC
TWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG
EEEEHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADI
HHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
NRIIIIGTGALLSSLTVKQGESIPSVAHAVVIEKIPGGENNNG
CEEEEEECHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]