| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is spoVAD [H]
Identifier: 220931550
GI number: 220931550
Start: 763094
End: 764125
Strand: Direct
Name: spoVAD [H]
Synonym: Hore_07060
Alternate gene names: 220931550
Gene position: 763094-764125 (Clockwise)
Preceding gene: 220931549
Following gene: 220931551
Centisome position: 29.6
GC content: 45.64
Gene sequence:
>1032_bases ATGGCTCAAAAGTTCAATGGACAGACCCTTACCTTTCAAAACCCTCCACATATCATAAGCCATGGATCTGTGGTGGGGCC AGAAGAAAAAAAAGGCCCACTGGGTAAAAACTTTGATTTGACATATGAAGATGCTAAATGTGGAGAGAAGACCTGGGAGA AGGGTGAAAAAAAGATGGTGTCAGATTCGGTTAATCTGGCCCTGCAGAAAGCAAATCTGACCACATCTGATATTGATATT ATTCTCGGTGGTGACCTCTTAAACCAGTTGATTACCGCCAATTTTGTGGCCCGGGATTATGATGTTCCCTATCTGGGTTT ATATGGAGCCTGTTCTACCATGGTTCAGGCCCTGGGCCTGGGTGCGGCTTTAATTGATGGCAGTTACGCAGATTGTGTTC TGGGATACTGTTCCAGTCACTACCAGACAGCCGAGCGTCAGTACAGGAATCCCCTGGAGTATGGGGTTCAGTATCCACCA TATAAGCAATGGACGGTAACCGGGGCCGGGTCATACATCCTGGGGCGGGTCGGCGGATCTACCTGGATTACCCATGCGAC TTTTGGAAAAGTAATGGATCTGGGACAAAAGGATGCCAATGATATGGGTGGGGCCATGGCGCCAGCAGCGGCTGACACCC TGATACAGCACTTTAAAGATCTGAACAGGGGTCCTCAGGATTATGACCTTATTTTGACAGGTGACCTGGGGAGAACGGGG AGAAAAATTCTTGATTCCCTGCTTGTAGAAAAAAATATAAATTTAGGTGAAAAGCTTCAGGACTGTGGGGCAATGCTATT AACTGATGAGAAAAAGTATGGTTCCGGTGGGAGTGGTTGTGCTGCTTCAGCAGTAGTTGTAGGAAGTGTAATTATACCTA AAATTATAAATGCTGATATAAATAGAATTATAATTATCGGGACCGGGGCTTTGCTCAGTTCTCTAACCGTAAAACAGGGG GAATCGATTCCTAGTGTTGCCCATGCGGTTGTCATAGAAAAAATTCCAGGTGGTGAAAACAATAATGGGTAA
Upstream 100 bases:
>100_bases CTGGGGGCCAAGTTGTTTACAGTTGCCGGACCTGTATTAACCTACGGAATGGTTTCTGCTTTTATAATAGGTTTACTCAA AGTAATCATGGGGGGATAAT
Downstream 100 bases:
>100_bases CTATTTGACAGCATTTTTTGTAGGTGGTTTAATATGTGCCCTGGGGCAGATTTTCCTTGATAACACTAAATATACGCCAG CTCATCTATTGGTTGGGCTG
Product: stage V sporulation protein AD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMVSDSVNLALQKANLTTSDIDI ILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGLGAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPP YKQWTVTGAGSYILGRVGGSTWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADINRIIIIGTGALLSSLTVKQG ESIPSVAHAVVIEKIPGGENNNG
Sequences:
>Translated_343_residues MAQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMVSDSVNLALQKANLTTSDIDI ILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGLGAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPP YKQWTVTGAGSYILGRVGGSTWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADINRIIIIGTGALLSSLTVKQG ESIPSVAHAVVIEKIPGGENNNG >Mature_342_residues AQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMVSDSVNLALQKANLTTSDIDII LGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGLGAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPPY KQWTVTGAGSYILGRVGGSTWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTGR KILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADINRIIIIGTGALLSSLTVKQGE SIPSVAHAVVIEKIPGGENNNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010894 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF07451 SpoVAD [H]
EC number: NA
Molecular weight: Translated: 36546; Mature: 36415
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMV CCCCCCCCEEEECCCCCEECCCCEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH SDSVNLALQKANLTTSDIDIILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGL HHHHHEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC GAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPPYKQWTVTGAGSYILGRVGGS CHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCEEEEECCCC TWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG EEEEHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADI HHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC NRIIIIGTGALLSSLTVKQGESIPSVAHAVVIEKIPGGENNNG CEEEEEECHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure AQKFNGQTLTFQNPPHIISHGSVVGPEEKKGPLGKNFDLTYEDAKCGEKTWEKGEKKMV CCCCCCCEEEECCCCCEECCCCEECCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH SDSVNLALQKANLTTSDIDIILGGDLLNQLITANFVARDYDVPYLGLYGACSTMVQALGL HHHHHEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC GAALIDGSYADCVLGYCSSHYQTAERQYRNPLEYGVQYPPYKQWTVTGAGSYILGRVGGS CHHEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEECCCCEEEEECCCC TWITHATFGKVMDLGQKDANDMGGAMAPAAADTLIQHFKDLNRGPQDYDLILTGDLGRTG EEEEHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHH RKILDSLLVEKNINLGEKLQDCGAMLLTDEKKYGSGGSGCAASAVVVGSVIIPKIINADI HHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC NRIIIIGTGALLSSLTVKQGESIPSVAHAVVIEKIPGGENNNG CEEEEEECHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]