Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is spoVAEB [H]

Identifier: 220931551

GI number: 220931551

Start: 764118

End: 764471

Strand: Direct

Name: spoVAEB [H]

Synonym: Hore_07070

Alternate gene names: 220931551

Gene position: 764118-764471 (Clockwise)

Preceding gene: 220931550

Following gene: 220931552

Centisome position: 29.64

GC content: 39.83

Gene sequence:

>354_bases
ATGGGTAACTATTTGACAGCATTTTTTGTAGGTGGTTTAATATGTGCCCTGGGGCAGATTTTCCTTGATAACACTAAATA
TACGCCAGCTCATCTATTGGTTGGGCTGGTAATTCTAGGATCTATCTTTACTGGACTGGGATGGTATGATAAATTGATTA
AGTTTGCCGGAGCCGGGATAACTGTTCCCGTTTCCAATTTTGGTTATGTTTTAACCAAGGGGGTTTTGATGGAGGCTCAA
AAAGATGGTCTCCTTGGTCTTTTTAAAGGGGTTTTTAAAATGGCCAGTGCCGGTGTCAGTGCTTCTGTAATAATTGCTTT
TTTTATTGCAAGCCTGTTTAATCCCAGAGTTTAA

Upstream 100 bases:

>100_bases
GGGGCTTTGCTCAGTTCTCTAACCGTAAAACAGGGGGAATCGATTCCTAGTGTTGCCCATGCGGTTGTCATAGAAAAAAT
TCCAGGTGGTGAAAACAATA

Downstream 100 bases:

>100_bases
TTAAGATTTTTCATATTAAGGTTCTATCACAATTGATTTGTCTTATCGTAACACTGGTTGACAACTTCTGTTTCACTGGC
CTTCAATTATTAACATAAGG

Product: Sporulation stage V protein AE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MGNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGITVPVSNFGYVLTKGVLMEAQ
KDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV

Sequences:

>Translated_117_residues
MGNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGITVPVSNFGYVLTKGVLMEAQ
KDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV
>Mature_116_residues
GNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGITVPVSNFGYVLTKGVLMEAQK
DGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014204
- InterPro:   IPR005562 [H]

Pfam domain/function: PF03862 SpoVA [H]

EC number: NA

Molecular weight: Translated: 12385; Mature: 12254

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
TVPVSNFGYVLTKGVLMEAQKDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV
EEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNYLTAFFVGGLICALGQIFLDNTKYTPAHLLVGLVILGSIFTGLGWYDKLIKFAGAGI
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
TVPVSNFGYVLTKGVLMEAQKDGLLGLFKGVFKMASAGVSASVIIAFFIASLFNPRV
EEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]