| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is spoIIM [H]
Identifier: 220931530
GI number: 220931530
Start: 742831
End: 743448
Strand: Direct
Name: spoIIM [H]
Synonym: Hore_06860
Alternate gene names: 220931530
Gene position: 742831-743448 (Clockwise)
Preceding gene: 220931529
Following gene: 220931531
Centisome position: 28.81
GC content: 27.67
Gene sequence:
>618_bases GTGAATAATGTAATGATTAATTTTTTTAGAAAGAGATTACCGGTCTTAATATTTGTTATCATTATTTTTTTAGCAGGAAT TTTTTCCGGTGCTGTTATGATTAATTCAGTGGACTTCAGTGTCAGACAAAATTTATTTAGTTACGTTAATAATTTTTTAA AGGAATTTAATTCACTGGGCTATAGTTCTACTACCCTGGCTGGTCAAAGTATTAAGTTTAATTTATTGAGTATATTTTTA ATATGGGCATTTGGACTATCTTTGATACTTATGCCTCTTATTCCGATTTTAGTTTTTTTTAAAGGGTTTGTACTCGGGTT TACAGTTGGTTTTATGGTTAATGAATTTAATTTTAAAGGTATATTAATGGCCATAGTTTCTATTTTACCTCAAAATTTAA TAATTGTACCTGTTTATACATTAGCCGGTATGATGGGGATATATTTCAGCATTAAAATATTTAATTTTTTTAGATCACAG AAGGAACTGAATATTGAAGACTTTTTATCCTATTCTTTATTGATGTTATTTTTGGGTCTCATCTCAATCGTGGGTTCAGT TATAGAATCTTTTGTAAGCCCCATGTTATTAAAAGTTGTTAGTAATTTACTGTTTTAA
Upstream 100 bases:
>100_bases CGGGGGTTTCTGGATATGCCCCTTGATGAAGAATAAACATATCCTGTCCCCCCGATGCATAAAATTTAAATATAAGCTCT CTATGCCGGGGGGATAACCA
Downstream 100 bases:
>100_bases AGTAAATGATTTAAGTTTAATACATATTTTTAATAAAAACTCTGGTTTAATAAAATCCCCTGACAGGGGATTTTTTTATG AAAAATTCTCCCCGGAACCC
Product: Sporulation stage II protein M
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNNVMINFFRKRLPVLIFVIIIFLAGIFSGAVMINSVDFSVRQNLFSYVNNFLKEFNSLGYSSTTLAGQSIKFNLLSIFL IWAFGLSLILMPLIPILVFFKGFVLGFTVGFMVNEFNFKGILMAIVSILPQNLIIVPVYTLAGMMGIYFSIKIFNFFRSQ KELNIEDFLSYSLLMLFLGLISIVGSVIESFVSPMLLKVVSNLLF
Sequences:
>Translated_205_residues MNNVMINFFRKRLPVLIFVIIIFLAGIFSGAVMINSVDFSVRQNLFSYVNNFLKEFNSLGYSSTTLAGQSIKFNLLSIFL IWAFGLSLILMPLIPILVFFKGFVLGFTVGFMVNEFNFKGILMAIVSILPQNLIIVPVYTLAGMMGIYFSIKIFNFFRSQ KELNIEDFLSYSLLMLFLGLISIVGSVIESFVSPMLLKVVSNLLF >Mature_205_residues MNNVMINFFRKRLPVLIFVIIIFLAGIFSGAVMINSVDFSVRQNLFSYVNNFLKEFNSLGYSSTTLAGQSIKFNLLSIFL IWAFGLSLILMPLIPILVFFKGFVLGFTVGFMVNEFNFKGILMAIVSILPQNLIIVPVYTLAGMMGIYFSIKIFNFFRSQ KELNIEDFLSYSLLMLFLGLISIVGSVIESFVSPMLLKVVSNLLF
Specific function: Required for complete septum migration and engulfment of the forespore compartment during sporulation [H]
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002798 - InterPro: IPR014196 [H]
Pfam domain/function: PF01944 DUF95 [H]
EC number: NA
Molecular weight: Translated: 23173; Mature: 23173
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVMINFFRKRLPVLIFVIIIFLAGIFSGAVMINSVDFSVRQNLFSYVNNFLKEFNSLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YSSTTLAGQSIKFNLLSIFLIWAFGLSLILMPLIPILVFFKGFVLGFTVGFMVNEFNFKG CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ILMAIVSILPQNLIIVPVYTLAGMMGIYFSIKIFNFFRSQKELNIEDFLSYSLLMLFLGL HHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ISIVGSVIESFVSPMLLKVVSNLLF HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNVMINFFRKRLPVLIFVIIIFLAGIFSGAVMINSVDFSVRQNLFSYVNNFLKEFNSLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YSSTTLAGQSIKFNLLSIFLIWAFGLSLILMPLIPILVFFKGFVLGFTVGFMVNEFNFKG CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ILMAIVSILPQNLIIVPVYTLAGMMGIYFSIKIFNFFRSQKELNIEDFLSYSLLMLFLGL HHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ISIVGSVIESFVSPMLLKVVSNLLF HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501064; 8969508; 9384377 [H]