| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931529
Identifier: 220931529
GI number: 220931529
Start: 742065
End: 742766
Strand: Direct
Name: 220931529
Synonym: Hore_06850
Alternate gene names: NA
Gene position: 742065-742766 (Clockwise)
Preceding gene: 220931528
Following gene: 220931530
Centisome position: 28.78
GC content: 43.73
Gene sequence:
>702_bases ATGGCAAAGTTATGGGTTAAAACCCTGAATATTTCCTTTAATGCGTCAGGAGCAGCAGCTGCTGCCCGACAGGGTAATGT AGTAATGGTGGTTGATGTAATTGATATGTCCACTACAGCTGAAGCTGCCCTTGAAGCAGGTGTCCTTGATGTGCTGGGAG CCTGTCCCGACCAGCATAATGTCCCGGTTACTGTTAATCCAGAAAAAATAGGTTATTTTGCCGGTAAAAAGGCTATAAAA AGTGAAACTGGGGTAGTTATTGCCGCTGAGCCACGTTATATCAATAATGATGATAGCGATGTAGATGGGATTAATAAGGT AGTTAAAGGGATAGAAAGGGCAGGAGCTAAAATTGAAAAGGTTGTGTCCAACATTGGGCGGGAGATTGTAAATCTTGTTG ACCTTGAGAATAAAGTTCTGGTGATTGTTAGTCCTTCCGGAGGGGCTGCCTTCGATGCTGCCTATAACTATGGTGCTCCT GAAGTAATAACAGGAACAGTAGCCCGGACAAATAAGATGAAGGGGAGTAAACCAGCCAAAATTGCCGCAGACAGGGCTAT AGAAAGTGCCCTGAAATGCCGTAGCGGTATTACCATAGTTTCTTCAAGTTCAAATTCAATGGAAGATGTTCAGGCCGCCC AGGTAATAGGACAAGAAATAATAAAACGGGGGTTTCTGGATATGCCCCTTGATGAAGAATAA
Upstream 100 bases:
>100_bases GTAAATGAATTGTCAGAACTTGTCGGAACCAGGATTGCAGGGAATATTGATAAGGCACGTTCTGGTAAGGCTTCTATAGA GCCCGGTGGAGGTGGTGTTT
Downstream 100 bases:
>100_bases ACATATCCTGTCCCCCCGATGCATAAAATTTAAATATAAGCTCTCTATGCCGGGGGGATAACCAGTGAATAATGTAATGA TTAATTTTTTTAGAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAKLWVKTLNISFNASGAAAAARQGNVVMVVDVIDMSTTAEAALEAGVLDVLGACPDQHNVPVTVNPEKIGYFAGKKAIK SETGVVIAAEPRYINNDDSDVDGINKVVKGIERAGAKIEKVVSNIGREIVNLVDLENKVLVIVSPSGGAAFDAAYNYGAP EVITGTVARTNKMKGSKPAKIAADRAIESALKCRSGITIVSSSSNSMEDVQAAQVIGQEIIKRGFLDMPLDEE
Sequences:
>Translated_233_residues MAKLWVKTLNISFNASGAAAAARQGNVVMVVDVIDMSTTAEAALEAGVLDVLGACPDQHNVPVTVNPEKIGYFAGKKAIK SETGVVIAAEPRYINNDDSDVDGINKVVKGIERAGAKIEKVVSNIGREIVNLVDLENKVLVIVSPSGGAAFDAAYNYGAP EVITGTVARTNKMKGSKPAKIAADRAIESALKCRSGITIVSSSSNSMEDVQAAQVIGQEIIKRGFLDMPLDEE >Mature_232_residues AKLWVKTLNISFNASGAAAAARQGNVVMVVDVIDMSTTAEAALEAGVLDVLGACPDQHNVPVTVNPEKIGYFAGKKAIKS ETGVVIAAEPRYINNDDSDVDGINKVVKGIERAGAKIEKVVSNIGREIVNLVDLENKVLVIVSPSGGAAFDAAYNYGAPE VITGTVARTNKMKGSKPAKIAADRAIESALKCRSGITIVSSSSNSMEDVQAAQVIGQEIIKRGFLDMPLDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24442; Mature: 24311
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLWVKTLNISFNASGAAAAARQGNVVMVVDVIDMSTTAEAALEAGVLDVLGACPDQHN CCCEEEEEEEEEECCCCCHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC VPVTVNPEKIGYFAGKKAIKSETGVVIAAEPRYINNDDSDVDGINKVVKGIERAGAKIEK CCEEECHHHHHHHHCCHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHCHHHHH VVSNIGREIVNLVDLENKVLVIVSPSGGAAFDAAYNYGAPEVITGTVARTNKMKGSKPAK HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHCCCCCHHEEECHHHCCCCCCCCCHH IAADRAIESALKCRSGITIVSSSSNSMEDVQAAQVIGQEIIKRGFLDMPLDEE HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AKLWVKTLNISFNASGAAAAARQGNVVMVVDVIDMSTTAEAALEAGVLDVLGACPDQHN CCEEEEEEEEEECCCCCHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC VPVTVNPEKIGYFAGKKAIKSETGVVIAAEPRYINNDDSDVDGINKVVKGIERAGAKIEK CCEEECHHHHHHHHCCHHHHCCCCEEEEECCCEECCCCCCHHHHHHHHHHHHHHCHHHHH VVSNIGREIVNLVDLENKVLVIVSPSGGAAFDAAYNYGAPEVITGTVARTNKMKGSKPAK HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHCCCCCHHEEECHHHCCCCCCCCCHH IAADRAIESALKCRSGITIVSSSSNSMEDVQAAQVIGQEIIKRGFLDMPLDEE HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA