| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqxK [H]
Identifier: 220931528
GI number: 220931528
Start: 740906
End: 742084
Strand: Direct
Name: yqxK [H]
Synonym: Hore_06840
Alternate gene names: 220931528
Gene position: 740906-742084 (Clockwise)
Preceding gene: 220931527
Following gene: 220931529
Centisome position: 28.74
GC content: 40.71
Gene sequence:
>1179_bases TTGCAGGAAATATATGCAGATCTTCATATACACATTGGCAGTGCCTGTGGGGGGCAGCCCGTAAAGGTGACTGCTTCCAG GAAACTTAACTTTCAAAACATCCTACAGGAGTCGTTGTACAGGAAGGGATTAAACCTTGTCGGGATTATAGATTCTGCTT CACCACTGGTAATAAATGATATAGAAGATCTCCTTGATAAAGGTATTATGGAAGAACTACCTGAAGGGGGGGTAAAATAT CAGGATAAGCTTTTTATTATCCTCGGTTCGGAAATTGAAAGCCGGGAAGAGAATGGGGGTCAGGCACACTATTTAGCTTA TTTCCCATTTTTAAGCCAGATAAAAGAATTTAGTCAATTATTGGGGAATTATATTACAAATATAAATCTCAGTTCCCAGG CTTGTCGTCTAACTGGCAGGGAGATTTTAAATATTGTTGATGAACTTGGAGGCCTTTTAATTCCTGCACATGCTTTTACG CCCCACAAAAGTTTTTATGGGAGGTGTTTTTCCGGCTACCGTGAAGTTTTTTCTGATGAAGAGTGGGAGAAGATTCCTGC TATTGAACTGGGGTTAAGTGCCGATACTCATCTGGCAGATTTTCTTTCAGAACTGGCGGGGAAATCTTTTCTAAGTAATT CCGACGCCCATTCTCTTGGGAAAATAGCCCGTGAATATAATAAAATGAGACTTGAGGATATTAATTTTAAGGAATTCAAA CTGGCATTACAGAGAAAAAAAGGCCGGTGTATAACATATAACTATGGCCTTGATCCCAGACTGGGTAAATACTATTCATC ATATTGCCTTCACTGCCAAAAAACAGTACCACTTACCGGAGGAGAAAGATGTTCACTCTGTGGGAGCCAGAAGATAATTA TGGGGGTAAAAGATCGTATTATAAATATAAGTAAACGAAATAAATCAATATCCCCTCCCTGGCGCCCCCCCTATGTACAT CAAATCCCCCTGGCCGATGTACCAGGGGTTGGCAAAAAGACCCTCAATAAATTATTAAAATCCTTTGGGACAGAAATGGA GATTATTCATCAGTCTGGGGTAAATGAATTGTCAGAACTTGTCGGAACCAGGATTGCAGGGAATATTGATAAGGCACGTT CTGGTAAGGCTTCTATAGAGCCCGGTGGAGGTGGTGTTTATGGCAAAGTTATGGGTTAA
Upstream 100 bases:
>100_bases AAAAATAGATGATGTTTTAGAATACATAGAATCAGGTAAAATTGAAGATGCCAAAACTATAATAGGGCTTTTATATTTAC TGAGAGAGGTGTTGTAAGCT
Downstream 100 bases:
>100_bases AACCCTGAATATTTCCTTTAATGCGTCAGGAGCAGCAGCTGCTGCCCGACAGGGTAATGTAGTAATGGTGGTTGATGTAA TTGATATGTCCACTACAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MQEIYADLHIHIGSACGGQPVKVTASRKLNFQNILQESLYRKGLNLVGIIDSASPLVINDIEDLLDKGIMEELPEGGVKY QDKLFIILGSEIESREENGGQAHYLAYFPFLSQIKEFSQLLGNYITNINLSSQACRLTGREILNIVDELGGLLIPAHAFT PHKSFYGRCFSGYREVFSDEEWEKIPAIELGLSADTHLADFLSELAGKSFLSNSDAHSLGKIAREYNKMRLEDINFKEFK LALQRKKGRCITYNYGLDPRLGKYYSSYCLHCQKTVPLTGGERCSLCGSQKIIMGVKDRIINISKRNKSISPPWRPPYVH QIPLADVPGVGKKTLNKLLKSFGTEMEIIHQSGVNELSELVGTRIAGNIDKARSGKASIEPGGGGVYGKVMG
Sequences:
>Translated_392_residues MQEIYADLHIHIGSACGGQPVKVTASRKLNFQNILQESLYRKGLNLVGIIDSASPLVINDIEDLLDKGIMEELPEGGVKY QDKLFIILGSEIESREENGGQAHYLAYFPFLSQIKEFSQLLGNYITNINLSSQACRLTGREILNIVDELGGLLIPAHAFT PHKSFYGRCFSGYREVFSDEEWEKIPAIELGLSADTHLADFLSELAGKSFLSNSDAHSLGKIAREYNKMRLEDINFKEFK LALQRKKGRCITYNYGLDPRLGKYYSSYCLHCQKTVPLTGGERCSLCGSQKIIMGVKDRIINISKRNKSISPPWRPPYVH QIPLADVPGVGKKTLNKLLKSFGTEMEIIHQSGVNELSELVGTRIAGNIDKARSGKASIEPGGGGVYGKVMG >Mature_392_residues MQEIYADLHIHIGSACGGQPVKVTASRKLNFQNILQESLYRKGLNLVGIIDSASPLVINDIEDLLDKGIMEELPEGGVKY QDKLFIILGSEIESREENGGQAHYLAYFPFLSQIKEFSQLLGNYITNINLSSQACRLTGREILNIVDELGGLLIPAHAFT PHKSFYGRCFSGYREVFSDEEWEKIPAIELGLSADTHLADFLSELAGKSFLSNSDAHSLGKIAREYNKMRLEDINFKEFK LALQRKKGRCITYNYGLDPRLGKYYSSYCLHCQKTVPLTGGERCSLCGSQKIIMGVKDRIINISKRNKSISPPWRPPYVH QIPLADVPGVGKKTLNKLLKSFGTEMEIIHQSGVNELSELVGTRIAGNIDKARSGKASIEPGGGGVYGKVMG
Specific function: Unknown
COG id: COG1379
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0043 N-terminal region [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005287 - InterPro: IPR016195 - InterPro: IPR010994 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43448; Mature: 43448
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIYADLHIHIGSACGGQPVKVTASRKLNFQNILQESLYRKGLNLVGIIDSASPLVIND CCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEHH IEDLLDKGIMEELPEGGVKYQDKLFIILGSEIESREENGGQAHYLAYFPFLSQIKEFSQL HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHH LGNYITNINLSSQACRLTGREILNIVDELGGLLIPAHAFTPHKSFYGRCFSGYREVFSDE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC EWEKIPAIELGLSADTHLADFLSELAGKSFLSNSDAHSLGKIAREYNKMRLEDINFKEFK CHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH LALQRKKGRCITYNYGLDPRLGKYYSSYCLHCQKTVPLTGGERCSLCGSQKIIMGVKDRI HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEHHHHH INISKRNKSISPPWRPPYVHQIPLADVPGVGKKTLNKLLKSFGTEMEIIHQSGVNELSEL EEHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEHHHHCCHHHHHHH VGTRIAGNIDKARSGKASIEPGGGGVYGKVMG HHHHHCCCCHHHCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MQEIYADLHIHIGSACGGQPVKVTASRKLNFQNILQESLYRKGLNLVGIIDSASPLVIND CCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEHH IEDLLDKGIMEELPEGGVKYQDKLFIILGSEIESREENGGQAHYLAYFPFLSQIKEFSQL HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHH LGNYITNINLSSQACRLTGREILNIVDELGGLLIPAHAFTPHKSFYGRCFSGYREVFSDE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC EWEKIPAIELGLSADTHLADFLSELAGKSFLSNSDAHSLGKIAREYNKMRLEDINFKEFK CHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH LALQRKKGRCITYNYGLDPRLGKYYSSYCLHCQKTVPLTGGERCSLCGSQKIIMGVKDRI HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEHHHHH INISKRNKSISPPWRPPYVHQIPLADVPGVGKKTLNKLLKSFGTEMEIIHQSGVNELSEL EEHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEHHHHCCHHHHHHH VGTRIAGNIDKARSGKASIEPGGGGVYGKVMG HHHHHCCCCHHHCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 8478318 [H]