The gene/protein map for NC_011899 is currently unavailable.
Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is yqhY [H]

Identifier: 220931471

GI number: 220931471

Start: 678093

End: 678491

Strand: Direct

Name: yqhY [H]

Synonym: Hore_06270

Alternate gene names: 220931471

Gene position: 678093-678491 (Clockwise)

Preceding gene: 220931470

Following gene: 220931472

Centisome position: 26.3

GC content: 39.35

Gene sequence:

>399_bases
ATGGTTGAGAAAGAAAGTTTGGGTTCAATTAAAATTGCCAATGAAGTGGTAGCAATTATTGCTGGTCTGGCTGCGACTGA
AGTTGATGGTGTTGCTGGCATGAGTGGTAATATTGCCGGTGGAATTGCTGAAATGCTGGGTCGAAAAAATCTATCCAAGG
GTGTTAAGGTTGAAGTTGGTGAAAAAGAGTGTGCGGTAGACCTTTTTGTGATAGTTGATTATGGTACTTCAATTTCTGAG
GTGGCCTGGGAAATCCAGAATAATGTTAAACAGGCTATTGAGAGTATGACTGGCCTGAAAATTGTAGAAATTAATGTTCA
TGTTCAGGAAGTTCATTTTGCTGAGGAAACTGAAGAAGAGGAAGAATTAGAAGAAGTAGAAGAAACAAGGGTCAAGTAA

Upstream 100 bases:

>100_bases
CCACTTAAAAATTTTAAATAATGCCTTTTTCCGTAAAGGTGAGTATTATACAAACTTTATTCAGAGAAGAATCTTATCAG
AAGGGTAGGAGGGGTAAAAA

Downstream 100 bases:

>100_bases
AGCTTGGCCCTTTTCAACAATATTTTTCACGAAAAAAGTCTGGAGGGAAATTAAAGTGAACCTATTTTACAGGTTTGTAG
TTTTTGTAATCACTGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MVEKESLGSIKIANEVVAIIAGLAATEVDGVAGMSGNIAGGIAEMLGRKNLSKGVKVEVGEKECAVDLFVIVDYGTSISE
VAWEIQNNVKQAIESMTGLKIVEINVHVQEVHFAEETEEEEELEEVEETRVK

Sequences:

>Translated_132_residues
MVEKESLGSIKIANEVVAIIAGLAATEVDGVAGMSGNIAGGIAEMLGRKNLSKGVKVEVGEKECAVDLFVIVDYGTSISE
VAWEIQNNVKQAIESMTGLKIVEINVHVQEVHFAEETEEEEELEEVEETRVK
>Mature_132_residues
MVEKESLGSIKIANEVVAIIAGLAATEVDGVAGMSGNIAGGIAEMLGRKNLSKGVKVEVGEKECAVDLFVIVDYGTSISE
VAWEIQNNVKQAIESMTGLKIVEINVHVQEVHFAEETEEEEELEEVEETRVK

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005531 [H]

Pfam domain/function: PF03780 DUF322 [H]

EC number: NA

Molecular weight: Translated: 14229; Mature: 14229

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKESLGSIKIANEVVAIIAGLAATEVDGVAGMSGNIAGGIAEMLGRKNLSKGVKVEVG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
EKECAVDLFVIVDYGTSISEVAWEIQNNVKQAIESMTGLKIVEINVHVQEVHFAEETEEE
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHH
EELEEVEETRVK
HHHHHHHHHCCC
>Mature Secondary Structure
MVEKESLGSIKIANEVVAIIAGLAATEVDGVAGMSGNIAGGIAEMLGRKNLSKGVKVEVG
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
EKECAVDLFVIVDYGTSISEVAWEIQNNVKQAIESMTGLKIVEINVHVQEVHFAEETEEE
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCHH
EELEEVEETRVK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]