| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931444
Identifier: 220931444
GI number: 220931444
Start: 653254
End: 653685
Strand: Direct
Name: 220931444
Synonym: Hore_06000
Alternate gene names: NA
Gene position: 653254-653685 (Clockwise)
Preceding gene: 220931443
Following gene: 220931445
Centisome position: 25.34
GC content: 36.11
Gene sequence:
>432_bases ATGAAGTTTTTTAAAACTCTGTACACAAGAGAATCAGGTATAACCCTGGTTGAAATTTTGATTGTAATTGCCATTATTGG AATTTTTGTGGGGATTGCCCTGCCGAGGCTAGGTGGTATGAGAGAAAGGGCCCAGGTTGCTACTGGAAAGAGTGTTCTGG GAACTATAAATACAGCACTGGGTTTATATTATTCGGAGTATGGTACCTATGAGTTAGGTTCGAACTATTCAGACATATCT GATCTTTTAAATGATTACATTGATAATTTAACTGCTACCCTTGGTGATTTTCAATTAGGAAATTACAATACACCTTCTGC TGATGAATTTACATTACAAATAGGTATTGACCAGAACGGTGATGGTAGTCTTACAGAAGCTGATGATTTAATTCTGGAAT TAGACCAGAATGGTGATATTGAAGTGAAATAA
Upstream 100 bases:
>100_bases TTAAATTTCGATAGAGGAGGTGAGTTCTGTAAGCCTGATTACTTTGTCTTAATTATGTTATTTATCAAATTAAAATTTTA AGGGGAGGTATTAATTAAAA
Downstream 100 bases:
>100_bases TAATTTTACAACAAGAACTTTATTAAGTGGCCCGGCTTTTGCCGGGTCACATCCAGATTAAGATAAAGTGGTGGTTATAT GAAATTATTTGTGTTTATCA
Product: Tfp pilus assembly protein, major pilin PilA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKFFKTLYTRESGITLVEILIVIAIIGIFVGIALPRLGGMRERAQVATGKSVLGTINTALGLYYSEYGTYELGSNYSDIS DLLNDYIDNLTATLGDFQLGNYNTPSADEFTLQIGIDQNGDGSLTEADDLILELDQNGDIEVK
Sequences:
>Translated_143_residues MKFFKTLYTRESGITLVEILIVIAIIGIFVGIALPRLGGMRERAQVATGKSVLGTINTALGLYYSEYGTYELGSNYSDIS DLLNDYIDNLTATLGDFQLGNYNTPSADEFTLQIGIDQNGDGSLTEADDLILELDQNGDIEVK >Mature_143_residues MKFFKTLYTRESGITLVEILIVIAIIGIFVGIALPRLGGMRERAQVATGKSVLGTINTALGLYYSEYGTYELGSNYSDIS DLLNDYIDNLTATLGDFQLGNYNTPSADEFTLQIGIDQNGDGSLTEADDLILELDQNGDIEVK
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15584; Mature: 15584
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFKTLYTRESGITLVEILIVIAIIGIFVGIALPRLGGMRERAQVATGKSVLGTINTAL CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH GLYYSEYGTYELGSNYSDISDLLNDYIDNLTATLGDFQLGNYNTPSADEFTLQIGIDQNG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEECCCCC DGSLTEADDLILELDQNGDIEVK CCCCCCCCCEEEEECCCCCEEEC >Mature Secondary Structure MKFFKTLYTRESGITLVEILIVIAIIGIFVGIALPRLGGMRERAQVATGKSVLGTINTAL CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH GLYYSEYGTYELGSNYSDISDLLNDYIDNLTATLGDFQLGNYNTPSADEFTLQIGIDQNG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEEECCCCC DGSLTEADDLILELDQNGDIEVK CCCCCCCCCEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA