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The map label for this gene is ydfS [H]

Identifier: 220931387

GI number: 220931387

Start: 590310

End: 590939

Strand: Reverse

Name: ydfS [H]

Synonym: Hore_05430

Alternate gene names: 220931387

Gene position: 590939-590310 (Counterclockwise)

Preceding gene: 220931389

Following gene: 220931386

Centisome position: 22.92

GC content: 34.44

Gene sequence:

>630_bases
TTGACTTTTTTTGATTTTGTTACCGGTATTACTATTGGAACAATTGGTGGGGCCTTTGTAACTACCCAGATTGAAGGGTT
CTATATTTTACTGAGCCCGGTAATCCTGGCTATTCTGGTTGTCCTGACCGGTTACCTGACCCTGAAAAGTACACCTGCCA
GAAAACTAATAGAAGGTGAACCCCTTGTCATAATCCAGAATGGTAAAATATATGAAAAAAACATGAAAAAATTAAGATAT
AACCTTGATGATCTTATGATGCAATTACGGGAACAGGGGGTCTTTGACCTGAGTGAAGTTGAATTTGCAATCCTTGAAAC
TGATGGCAAACTCAGTGTTTTAAAGAAAAGTCAATACCAACCAGTAAAACCCAGGGATTTAAATATAAATACCAGGTACG
TAGGCCTGTCTTCTGAAATAATTAGAGATGGACAAATTGTTGAACAAAACCTGAAACAAAACAATCTAACCCATGAATGG
TTATATAATGAACTGGCTAAACAAAATATAAAAAATATAAGAAATATTGTTCTCGCCACTCTTTCTACTGATGGCAACCT
ATATATTGATGTTAAAAATGATAACCATTCATATATTCAGGAAATAGAAGATGATGATTCTATGATATAA

Upstream 100 bases:

>100_bases
TGATTACAATGAAATCTTACAGGTATTAGGTTATTCTCTAATTGTATTTTTTTTACTAATAATATTAACCCGTCTGATAG
GAAAAAAATTTTTATCACAA

Downstream 100 bases:

>100_bases
AAAGATTTTTGTCATATAAACCCACTTATTTGTCGAATATTTATGATTTATATCAAAATTAGAATTTTTTCAGTGTAAAA
AGGATTTTCGACAAAAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTFFDFVTGITIGTIGGAFVTTQIEGFYILLSPVILAILVVLTGYLTLKSTPARKLIEGEPLVIIQNGKIYEKNMKKLRY
NLDDLMMQLREQGVFDLSEVEFAILETDGKLSVLKKSQYQPVKPRDLNINTRYVGLSSEIIRDGQIVEQNLKQNNLTHEW
LYNELAKQNIKNIRNIVLATLSTDGNLYIDVKNDNHSYIQEIEDDDSMI

Sequences:

>Translated_209_residues
MTFFDFVTGITIGTIGGAFVTTQIEGFYILLSPVILAILVVLTGYLTLKSTPARKLIEGEPLVIIQNGKIYEKNMKKLRY
NLDDLMMQLREQGVFDLSEVEFAILETDGKLSVLKKSQYQPVKPRDLNINTRYVGLSSEIIRDGQIVEQNLKQNNLTHEW
LYNELAKQNIKNIRNIVLATLSTDGNLYIDVKNDNHSYIQEIEDDDSMI
>Mature_208_residues
TFFDFVTGITIGTIGGAFVTTQIEGFYILLSPVILAILVVLTGYLTLKSTPARKLIEGEPLVIIQNGKIYEKNMKKLRYN
LDDLMMQLREQGVFDLSEVEFAILETDGKLSVLKKSQYQPVKPRDLNINTRYVGLSSEIIRDGQIVEQNLKQNNLTHEWL
YNELAKQNIKNIRNIVLATLSTDGNLYIDVKNDNHSYIQEIEDDDSMI

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 23819; Mature: 23688

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFDFVTGITIGTIGGAFVTTQIEGFYILLSPVILAILVVLTGYLTLKSTPARKLIEGE
CCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCC
PLVIIQNGKIYEKNMKKLRYNLDDLMMQLREQGVFDLSEVEFAILETDGKLSVLKKSQYQ
CEEEEECCEEEHHHHHHHHCCHHHHHHHHHHCCCCCHHHCEEEEEECCCCEEEEECCCCC
PVKPRDLNINTRYVGLSSEIIRDGQIVEQNLKQNNLTHEWLYNELAKQNIKNIRNIVLAT
CCCCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEE
LSTDGNLYIDVKNDNHSYIQEIEDDDSMI
EECCCEEEEEEECCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
TFFDFVTGITIGTIGGAFVTTQIEGFYILLSPVILAILVVLTGYLTLKSTPARKLIEGE
CHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCC
PLVIIQNGKIYEKNMKKLRYNLDDLMMQLREQGVFDLSEVEFAILETDGKLSVLKKSQYQ
CEEEEECCEEEHHHHHHHHCCHHHHHHHHHHCCCCCHHHCEEEEEECCCCEEEEECCCCC
PVKPRDLNINTRYVGLSSEIIRDGQIVEQNLKQNNLTHEWLYNELAKQNIKNIRNIVLAT
CCCCCCCCCCEEEECCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEE
LSTDGNLYIDVKNDNHSYIQEIEDDDSMI
EECCCEEEEEEECCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]