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The map label for this gene is 220931371

Identifier: 220931371

GI number: 220931371

Start: 573312

End: 573845

Strand: Reverse

Name: 220931371

Synonym: Hore_05260

Alternate gene names: NA

Gene position: 573845-573312 (Counterclockwise)

Preceding gene: 220931381

Following gene: 220931369

Centisome position: 22.26

GC content: 28.84

Gene sequence:

>534_bases
ATGAAAGATATATTTATGTTGCTTTCAATTGATTTTGTTAAAATTTATTTTTATAAATTGGTTACAATAACCTTTGTGGT
TTTATTTACCAACATTATTGTTTTTATAATAGAAAACTTTTTTAATAAAATAATGAAAAAAGAAAAACTGACACCGGTTT
ATTTACCTGTAATAATTAATTTAATAAAATTTATTTTATGGATCCTATCTATTGGAATAGTGCTAATTATTTTAGGGTTT
AAAGAACTGGCCATTACCCTCGGAGGGGTAGTGGCCGTATTTGGTTTTGTTTCGGCTCAAACCCTTAGCAGTATATTAAG
GGATTTAATAGCAGGTGTATTTTTAATACTGGATGATGATTTTAACACCGGTTACCGGGTCAGGGTTAATAAAGTGGAAG
GAGAAGTATTAACTATAAATATACGGAAAACAAAAATAAAAGACTCCCATAATAATATTCATATAATCCCTAACAGGAAG
GTTGATAACAACTATATTTTAATCAGTAGCCCTGGTAACACAAACCCCGATTAA

Upstream 100 bases:

>100_bases
AAGATATGCTTATTATTTATGGATATTACCATAATTCACGTTCTTATATAAGCCCTTAAAACATATAAATAAATAACTTT
TATCCAGAAAGGTTAAGCAA

Downstream 100 bases:

>100_bases
TCCCGGGCCTGAATGAACAACCATAGCCGGACTTATTTCACCAAAATATGTATCCTTAACATTTTCCAGTTTTTTTAATT
TATCAAGTAATTCCCGAGCT

Product: small-conductance mechanosensitive channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKDIFMLLSIDFVKIYFYKLVTITFVVLFTNIIVFIIENFFNKIMKKEKLTPVYLPVIINLIKFILWILSIGIVLIILGF
KELAITLGGVVAVFGFVSAQTLSSILRDLIAGVFLILDDDFNTGYRVRVNKVEGEVLTINIRKTKIKDSHNNIHIIPNRK
VDNNYILISSPGNTNPD

Sequences:

>Translated_177_residues
MKDIFMLLSIDFVKIYFYKLVTITFVVLFTNIIVFIIENFFNKIMKKEKLTPVYLPVIINLIKFILWILSIGIVLIILGF
KELAITLGGVVAVFGFVSAQTLSSILRDLIAGVFLILDDDFNTGYRVRVNKVEGEVLTINIRKTKIKDSHNNIHIIPNRK
VDNNYILISSPGNTNPD
>Mature_177_residues
MKDIFMLLSIDFVKIYFYKLVTITFVVLFTNIIVFIIENFFNKIMKKEKLTPVYLPVIINLIKFILWILSIGIVLIILGF
KELAITLGGVVAVFGFVSAQTLSSILRDLIAGVFLILDDDFNTGYRVRVNKVEGEVLTINIRKTKIKDSHNNIHIIPNRK
VDNNYILISSPGNTNPD

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20165; Mature: 20165

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIFMLLSIDFVKIYFYKLVTITFVVLFTNIIVFIIENFFNKIMKKEKLTPVYLPVIIN
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LIKFILWILSIGIVLIILGFKELAITLGGVVAVFGFVSAQTLSSILRDLIAGVFLILDDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
FNTGYRVRVNKVEGEVLTINIRKTKIKDSHNNIHIIPNRKVDNNYILISSPGNTNPD
CCCCEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEECCEECCCEEEEECCCCCCCC
>Mature Secondary Structure
MKDIFMLLSIDFVKIYFYKLVTITFVVLFTNIIVFIIENFFNKIMKKEKLTPVYLPVIIN
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LIKFILWILSIGIVLIILGFKELAITLGGVVAVFGFVSAQTLSSILRDLIAGVFLILDDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
FNTGYRVRVNKVEGEVLTINIRKTKIKDSHNNIHIIPNRKVDNNYILISSPGNTNPD
CCCCEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEECCEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA