| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931369
Identifier: 220931369
GI number: 220931369
Start: 571868
End: 572278
Strand: Reverse
Name: 220931369
Synonym: Hore_05240
Alternate gene names: NA
Gene position: 572278-571868 (Counterclockwise)
Preceding gene: 220931371
Following gene: 220931368
Centisome position: 22.2
GC content: 37.23
Gene sequence:
>411_bases ATGACTTACATATACAGATTTATAATTTACGGATTAAGTGGATGGTGTCTTGAAATAGTGTGGACAGGCCTGGGCTCCTT TTTAAGGGGAGACATTAACTTAAGGGGATGGACTTATCTCTGGATGTTCCCAATTTATGGTATGGCTTTATTAATGGAAC CAGTTCACAATCAGATAAGGAACTGGCCTGCTATAATAAGGGGAGGTGTCTATACTCTAATTATTTTTACTATAGAATAC AGTTCAGGCTGGTTTTTAGAGAATATAATAGGGACCTGTCCCTGGGATTACAGCAAAAGTCGTTATTCTATTAAAGGCTT TATTCGTTTAGACTATGCACCTGCCTGGTTTATAGCTGGTTTGCTCTTTGAAAAATTACATGATACTCTAACCAGAATAC ACTATGCATAG
Upstream 100 bases:
>100_bases TCCTGGTTATAACATTTTATATTATGAAGAAAACCATGACATTGTGATATTTATAAGTTTCCTTTTTAATAATTTTTACA AATATACAAAAAATATTTGT
Downstream 100 bases:
>100_bases TTTTTTATTTATTTGACTTGAATATTTATTATCTTAAAACACTATAATATTAAAAAAGACTTCAGGTGGTGTTATATGGA AAATACTTCTCTCGATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTYIYRFIIYGLSGWCLEIVWTGLGSFLRGDINLRGWTYLWMFPIYGMALLMEPVHNQIRNWPAIIRGGVYTLIIFTIEY SSGWFLENIIGTCPWDYSKSRYSIKGFIRLDYAPAWFIAGLLFEKLHDTLTRIHYA
Sequences:
>Translated_136_residues MTYIYRFIIYGLSGWCLEIVWTGLGSFLRGDINLRGWTYLWMFPIYGMALLMEPVHNQIRNWPAIIRGGVYTLIIFTIEY SSGWFLENIIGTCPWDYSKSRYSIKGFIRLDYAPAWFIAGLLFEKLHDTLTRIHYA >Mature_135_residues TYIYRFIIYGLSGWCLEIVWTGLGSFLRGDINLRGWTYLWMFPIYGMALLMEPVHNQIRNWPAIIRGGVYTLIIFTIEYS SGWFLENIIGTCPWDYSKSRYSIKGFIRLDYAPAWFIAGLLFEKLHDTLTRIHYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32698890, Length=131, Percent_Identity=31.2977099236641, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16051; Mature: 15920
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYIYRFIIYGLSGWCLEIVWTGLGSFLRGDINLRGWTYLWMFPIYGMALLMEPVHNQIR CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NWPAIIRGGVYTLIIFTIEYSSGWFLENIIGTCPWDYSKSRYSIKGFIRLDYAPAWFIAG CCHHHHHCCEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHH LLFEKLHDTLTRIHYA HHHHHHHHHHHHHCCC >Mature Secondary Structure TYIYRFIIYGLSGWCLEIVWTGLGSFLRGDINLRGWTYLWMFPIYGMALLMEPVHNQIR HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NWPAIIRGGVYTLIIFTIEYSSGWFLENIIGTCPWDYSKSRYSIKGFIRLDYAPAWFIAG CCHHHHHCCEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHH LLFEKLHDTLTRIHYA HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA