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The map label for this gene is 220931370

Identifier: 220931370

GI number: 220931370

Start: 572493

End: 573347

Strand: Direct

Name: 220931370

Synonym: Hore_05250

Alternate gene names: NA

Gene position: 572493-573347 (Clockwise)

Preceding gene: 220931365

Following gene: 220931372

Centisome position: 22.21

GC content: 34.5

Gene sequence:

>855_bases
ATGAAAGAAAAGATAGCCCTTGTTACAGACAGCACATGTGACCTACCCCAGCAAACATTAGATAATAGTATAATAAGTTG
TTTGCCTTTGAAAATAATATATGGTGATAAAGAATACCGAGACCGTTTGGATATTAAACCAGGGGAAATTTATGATAAAA
TAGAGGATAAAATCCCAACTACCTCTATGCCAGGACCTGATGATATCCAGAAGGAATTATTGAAATTAAAGGACAGGGGA
TTCACACATGTTCTTGCTATTCACATTTCCAGTGGTTTAAGTAGTACATATGAGATAAGTAATATGGTAGGCAAACAAAT
AGAGGGGTTGACTGTAGAAGTAATTGACTCTAAATTAATATCAATGGGGTTAGGAAGACTTGTCCTTTATGCAAAAGAAT
TGATTGAAGCCCGGAAGTTTGATTTTAATGAAATAGTTAATAAAGTAAGAGCTAAGATTAATGATGTTGAGTTGTATTTT
GTGGTAAAAACTTTGAAATACCTTATTCATGGGGGTAGAATAGGAAAGGTAAAGGGAACTATTGGTGAATTATTAAATTT
AAAACCTATTATATCTATGGACAGTGAAGGTGAATACTACACTTTCAAGAAGGTTCGCAGTCGTAAAAGGTCCCTGGGGC
AGCTATTTAAAATTGTTAGAGAAAAAATAAAAGAAGGAATTTGTTATGTTGACGTAATGCATGCTAATGCAGAACAGGAA
GCTCGGGAATTACTTGATAAATTAAAAAAACTGGAAAATGTTAAGGATACATATTTTGGTGAAATAAGTCCGGCTATGGT
TGTTCATTCAGGCCCGGGATTAATCGGGGTTTGTGTTACCAGGGCTACTGATTAA

Upstream 100 bases:

>100_bases
TTATTTGTTAATTTGTCATTTTATCTTTACCTATTTTGGGACATAATGAATATAGAAATGAATTTAAAAGATGAAATATT
TATTGAATAGGAGGGTGGTT

Downstream 100 bases:

>100_bases
AATATAGTTGTTATCAACCTTCCTGTTAGGGATTATATGAATATTATTATGGGAGTCTTTTATTTTTGTTTTCCGTATAT
TTATAGTTAATACTTCTCCT

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKEKIALVTDSTCDLPQQTLDNSIISCLPLKIIYGDKEYRDRLDIKPGEIYDKIEDKIPTTSMPGPDDIQKELLKLKDRG
FTHVLAIHISSGLSSTYEISNMVGKQIEGLTVEVIDSKLISMGLGRLVLYAKELIEARKFDFNEIVNKVRAKINDVELYF
VVKTLKYLIHGGRIGKVKGTIGELLNLKPIISMDSEGEYYTFKKVRSRKRSLGQLFKIVREKIKEGICYVDVMHANAEQE
ARELLDKLKKLENVKDTYFGEISPAMVVHSGPGLIGVCVTRATD

Sequences:

>Translated_284_residues
MKEKIALVTDSTCDLPQQTLDNSIISCLPLKIIYGDKEYRDRLDIKPGEIYDKIEDKIPTTSMPGPDDIQKELLKLKDRG
FTHVLAIHISSGLSSTYEISNMVGKQIEGLTVEVIDSKLISMGLGRLVLYAKELIEARKFDFNEIVNKVRAKINDVELYF
VVKTLKYLIHGGRIGKVKGTIGELLNLKPIISMDSEGEYYTFKKVRSRKRSLGQLFKIVREKIKEGICYVDVMHANAEQE
ARELLDKLKKLENVKDTYFGEISPAMVVHSGPGLIGVCVTRATD
>Mature_284_residues
MKEKIALVTDSTCDLPQQTLDNSIISCLPLKIIYGDKEYRDRLDIKPGEIYDKIEDKIPTTSMPGPDDIQKELLKLKDRG
FTHVLAIHISSGLSSTYEISNMVGKQIEGLTVEVIDSKLISMGLGRLVLYAKELIEARKFDFNEIVNKVRAKINDVELYF
VVKTLKYLIHGGRIGKVKGTIGELLNLKPIISMDSEGEYYTFKKVRSRKRSLGQLFKIVREKIKEGICYVDVMHANAEQE
ARELLDKLKKLENVKDTYFGEISPAMVVHSGPGLIGVCVTRATD

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32010; Mature: 32010

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKIALVTDSTCDLPQQTLDNSIISCLPLKIIYGDKEYRDRLDIKPGEIYDKIEDKIPT
CCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHCCCCCCHHHHHHHHCCCC
TSMPGPDDIQKELLKLKDRGFTHVLAIHISSGLSSTYEISNMVGKQIEGLTVEVIDSKLI
CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
SMGLGRLVLYAKELIEARKFDFNEIVNKVRAKINDVELYFVVKTLKYLIHGGRIGKVKGT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECHHH
IGELLNLKPIISMDSEGEYYTFKKVRSRKRSLGQLFKIVREKIKEGICYVDVMHANAEQE
HHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH
ARELLDKLKKLENVKDTYFGEISPAMVVHSGPGLIGVCVTRATD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCC
>Mature Secondary Structure
MKEKIALVTDSTCDLPQQTLDNSIISCLPLKIIYGDKEYRDRLDIKPGEIYDKIEDKIPT
CCCCEEEEECCCCCCCHHHHHHHHHHHHCEEEEECCHHHHHHCCCCCCHHHHHHHHCCCC
TSMPGPDDIQKELLKLKDRGFTHVLAIHISSGLSSTYEISNMVGKQIEGLTVEVIDSKLI
CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
SMGLGRLVLYAKELIEARKFDFNEIVNKVRAKINDVELYFVVKTLKYLIHGGRIGKVKGT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEECHHH
IGELLNLKPIISMDSEGEYYTFKKVRSRKRSLGQLFKIVREKIKEGICYVDVMHANAEQE
HHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH
ARELLDKLKKLENVKDTYFGEISPAMVVHSGPGLIGVCVTRATD
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]