Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is ykvI [H]

Identifier: 220931358

GI number: 220931358

Start: 560037

End: 561044

Strand: Direct

Name: ykvI [H]

Synonym: Hore_05130

Alternate gene names: 220931358

Gene position: 560037-561044 (Clockwise)

Preceding gene: 220931355

Following gene: 220931362

Centisome position: 21.72

GC content: 46.23

Gene sequence:

>1008_bases
GTGGTCGGAGCCGGTTTTGCTTCAGGTCAGGAGGTCCTTCAGTTTTTTGGTTTTTATGGTCTCGGGGGATTTGGCGGCCT
GGTTTTAACGATTATGTTATTTGTTATTTATGGATATATCATCTTAAGCCTGGGCAGGGAATACAGGGCCCGTTCTCATC
TTGAGGTGATTCGTTATGCCGGGGGCCGGTGGTTGAGTAAAGTTATTGATGGGGTTATTACTTTTTTTCTCTTTGGTGCT
TTAACAGCAATGGTGGCCGGGTCAGGGGCTATTTTCCTGGAGCAGTTTGGTATTCCTTCCCTGTGGGGGAATATTGCTAT
GATCGGAGCCTCAATACTGACAACTTTATTCGGAATTGGCGGAGTTATTTCTGCCATTAGTTTTGTAGTTCCCCTGCTTT
TAACAGGTGTTTTTCTGGCTACCATAGCATCAGTTATAGGGGCTTTACCGGTAAACATAGCTGACCTCCATCAGGCTCTT
CCGGGGAGGGCTCCGGTGCCACACTGGGCTTTATCCTCAGTTGTTTATGCATCCTATAATATTGTACTTGCTGTAGCAGT
TCTGGCTCCCCTCGGGAGCAGGGTAAATGATAAGAGAAAGCTAAAGTATGGTGCTATTTTTGGTGGAGTGGGTTTAGGAC
TGGGGGCCATGTTTATCCTTTTAGCGATACTGCTTAATATACCCCGGGTATTGGAATATGAGATTCCCATGATTTATGTA
GCCGGTAATTTTGCTCCCTGGTTTCAGCTCGTTTACAGTGGTATCTTACTGGCAGAGATTTATACTACTGCGGTAGGTAA
CCTTTATGGTTTTGTAGCCCGCCTTACCGATCCAGAAGGTAAGAAATACCGGACATACATTATTTTAACCGGGGTTGCTG
CATTTATAACCAGTCAGCTTGGTTTTTCCAACCTGGTACGCTACCTCTACCCGGCAGTAGGTTATGCTGGTTTACTCCTG
CTGGGAGGTTTAACACTGGGGATGTACCGGCGGGTCCGGAACAGATAA

Upstream 100 bases:

>100_bases
AAGGTAATGAAATAAAGGGAGTAGATGTAAAGACAAATGATGGAGAGACCACGGGGGGAGGTTTACTACCTTTCAGATTG
CGGCAACCTATATCGGGACA

Downstream 100 bases:

>100_bases
GTTTGGTGGGAAAATAATCAAAATTTTATAGTTTAAACTTTTTTTATCAAAAAAATATCTTACTATCAAAAATATTTTAC
TATACAAATAATATAGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYAGGRWLSKVIDGVITFFLFGA
LTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIGGVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQAL
PGRAPVPHWALSSVVYASYNIVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV
AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQLGFSNLVRYLYPAVGYAGLLL
LGGLTLGMYRRVRNR

Sequences:

>Translated_335_residues
MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYAGGRWLSKVIDGVITFFLFGA
LTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIGGVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQAL
PGRAPVPHWALSSVVYASYNIVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV
AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQLGFSNLVRYLYPAVGYAGLLL
LGGLTLGMYRRVRNR
>Mature_335_residues
MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYAGGRWLSKVIDGVITFFLFGA
LTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIGGVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQAL
PGRAPVPHWALSSVVYASYNIVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV
AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQLGFSNLVRYLYPAVGYAGLLL
LGGLTLGMYRRVRNR

Specific function: Unknown

COG id: COG3949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35899; Mature: 35899

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYA
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGRWLSKVIDGVITFFLFGALTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQALPGRAPVPHWALSSVVYASYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCEEEE
AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQL
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHC
GFSNLVRYLYPAVGYAGLLLLGGLTLGMYRRVRNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVGAGFASGQEVLQFFGFYGLGGFGGLVLTIMLFVIYGYIILSLGREYRARSHLEVIRYA
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGRWLSKVIDGVITFFLFGALTAMVAGSGAIFLEQFGIPSLWGNIAMIGASILTTLFGIG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
GVISAISFVVPLLLTGVFLATIASVIGALPVNIADLHQALPGRAPVPHWALSSVVYASYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IVLAVAVLAPLGSRVNDKRKLKYGAIFGGVGLGLGAMFILLAILLNIPRVLEYEIPMIYV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCEEEE
AGNFAPWFQLVYSGILLAEIYTTAVGNLYGFVARLTDPEGKKYRTYIILTGVAAFITSQL
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHC
GFSNLVRYLYPAVGYAGLLLLGGLTLGMYRRVRNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]