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The map label for this gene is dppC [H]

Identifier: 220931337

GI number: 220931337

Start: 534585

End: 535463

Strand: Direct

Name: dppC [H]

Synonym: Hore_04920

Alternate gene names: 220931337

Gene position: 534585-535463 (Clockwise)

Preceding gene: 220931336

Following gene: 220931338

Centisome position: 20.74

GC content: 43.23

Gene sequence:

>879_bases
ATGACATGGCAAGAGCTCTTTAAGCGTTTATTAAAAAATAAATTATCTTTGTTTGGGTTAATCATTATAGTATTTTTTGC
TCTGATTGCTATATTTGCTCCATTTATCGCCCCACCGGCTGATCCTGATGATCCGTATGCTATTCCCCGGAGTGGCTGGA
TTATGGAGCCAACCCCTCCTGATGAGGATAATATCTTCGGTACCACTGAAGGTTCCTATGATATATTCTATGGTATGATC
TGGGGGACAAGGACCGCTTTTAGGATCGGTTTTATTGTAGTTGGTATCTCAACGATAATTGGTGTTATTATCGGGACTAT
TTCAGCCTATTATGGTGGCTGGGTAGACGAGATAGTAATGAGGATAACCGATATCTTTATGTCAATACCATTTCTGGTGT
CAGCCCTGGTATTGACTGCTATCCTGGGTAAAGGACTGGATAATGTTATGATAGCTCTGATTGTCTTTGGCTGGATGGGT
ACAGCCCGTTTGATGCGTTCCCAGGTTTTAGAGATAAAAGCCGAAGAATTTGTTCAGGCTGCATCTGCTCTGGGGGCTGG
CGATTTGAGGATTATATTCCGCCATGTTCTTTTAAACTGTATCTTCCCGGTAGTAATTCAGGCTTCTATGAGAATGGGGT
CTATGGTTATAACAGCTGCTACCCTGAGTTTCCTTGGTGTAGGAGCCCCTCCAGGGTATGCTGACTGGGGACAGATGATA
TCCTTTGCCCGTAACTGGATTATCGGGGCCCAGGGTAATGCCCTGTCCTACTGGTATACCCTTGTTATCCCGGGAACTGC
TATTACATTATTCTGTTTATCCTGGAATTTAATCGGTGATGCTTTCCGCGATATACTTGATCCAAAACTGCAAAATTAA

Upstream 100 bases:

>100_bases
TGTTGCTATGTACTTTGGTCTGTTACTTATTCTCATTAACCTAGCTGTCGATGTTTCTTATGCTATTATAGATCCAAGAA
TAAGATTGGAGTGATGAAAG

Downstream 100 bases:

>100_bases
GATAAAGGTAGGTGAATATAGTTGGCCAGAGAAAAACTTATTGACGTAAATAATCTAAAAACGTATTTCTACACCGAACA
GGGTGTATCTAAGGCTGTAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTWQELFKRLLKNKLSLFGLIIIVFFALIAIFAPFIAPPADPDDPYAIPRSGWIMEPTPPDEDNIFGTTEGSYDIFYGMI
WGTRTAFRIGFIVVGISTIIGVIIGTISAYYGGWVDEIVMRITDIFMSIPFLVSALVLTAILGKGLDNVMIALIVFGWMG
TARLMRSQVLEIKAEEFVQAASALGAGDLRIIFRHVLLNCIFPVVIQASMRMGSMVITAATLSFLGVGAPPGYADWGQMI
SFARNWIIGAQGNALSYWYTLVIPGTAITLFCLSWNLIGDAFRDILDPKLQN

Sequences:

>Translated_292_residues
MTWQELFKRLLKNKLSLFGLIIIVFFALIAIFAPFIAPPADPDDPYAIPRSGWIMEPTPPDEDNIFGTTEGSYDIFYGMI
WGTRTAFRIGFIVVGISTIIGVIIGTISAYYGGWVDEIVMRITDIFMSIPFLVSALVLTAILGKGLDNVMIALIVFGWMG
TARLMRSQVLEIKAEEFVQAASALGAGDLRIIFRHVLLNCIFPVVIQASMRMGSMVITAATLSFLGVGAPPGYADWGQMI
SFARNWIIGAQGNALSYWYTLVIPGTAITLFCLSWNLIGDAFRDILDPKLQN
>Mature_291_residues
TWQELFKRLLKNKLSLFGLIIIVFFALIAIFAPFIAPPADPDDPYAIPRSGWIMEPTPPDEDNIFGTTEGSYDIFYGMIW
GTRTAFRIGFIVVGISTIIGVIIGTISAYYGGWVDEIVMRITDIFMSIPFLVSALVLTAILGKGLDNVMIALIVFGWMGT
ARLMRSQVLEIKAEEFVQAASALGAGDLRIIFRHVLLNCIFPVVIQASMRMGSMVITAATLSFLGVGAPPGYADWGQMIS
FARNWIIGAQGNALSYWYTLVIPGTAITLFCLSWNLIGDAFRDILDPKLQN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=280, Percent_Identity=37.5, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1787054, Length=290, Percent_Identity=33.448275862069, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789964, Length=292, Percent_Identity=35.958904109589, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787498, Length=290, Percent_Identity=31.7241379310345, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1789889, Length=249, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1788505, Length=276, Percent_Identity=27.1739130434783, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787549, Length=288, Percent_Identity=25.6944444444444, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32164; Mature: 32033

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWQELFKRLLKNKLSLFGLIIIVFFALIAIFAPFIAPPADPDDPYAIPRSGWIMEPTPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
DEDNIFGTTEGSYDIFYGMIWGTRTAFRIGFIVVGISTIIGVIIGTISAYYGGWVDEIVM
CCCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RITDIFMSIPFLVSALVLTAILGKGLDNVMIALIVFGWMGTARLMRSQVLEIKAEEFVQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASALGAGDLRIIFRHVLLNCIFPVVIQASMRMGSMVITAATLSFLGVGAPPGYADWGQMI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
SFARNWIIGAQGNALSYWYTLVIPGTAITLFCLSWNLIGDAFRDILDPKLQN
HHHHHHEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TWQELFKRLLKNKLSLFGLIIIVFFALIAIFAPFIAPPADPDDPYAIPRSGWIMEPTPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
DEDNIFGTTEGSYDIFYGMIWGTRTAFRIGFIVVGISTIIGVIIGTISAYYGGWVDEIVM
CCCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RITDIFMSIPFLVSALVLTAILGKGLDNVMIALIVFGWMGTARLMRSQVLEIKAEEFVQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASALGAGDLRIIFRHVLLNCIFPVVIQASMRMGSMVITAATLSFLGVGAPPGYADWGQMI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
SFARNWIIGAQGNALSYWYTLVIPGTAITLFCLSWNLIGDAFRDILDPKLQN
HHHHHHEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]