Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220931299

Identifier: 220931299

GI number: 220931299

Start: 487996

End: 488436

Strand: Direct

Name: 220931299

Synonym: Hore_04540

Alternate gene names: NA

Gene position: 487996-488436 (Clockwise)

Preceding gene: 220931298

Following gene: 220931300

Centisome position: 18.93

GC content: 29.71

Gene sequence:

>441_bases
ATGCCAAAAAGAATATATAAATATTTTATTTTTATCATGTCGCTTGTTTTCTTTGTTTTAAGTATCTACTATTTCCAGAT
GAATGTCTATGAGATAGGTTTAAAGCCATACAATAATCTAAAAAGTGATAGGATGACAGGTATAGAAGAGTTTTTACTTC
ATGTTGATAAAGCTTCTAAAGTAATTTTATTGCATAATGCAAAGATTGGGGGAGGTTATGTTGAGTTTAAAATAACGGGG
GAGGATGGGCGTATAATTGACAAATATCGATTAAGTAGTAATAAATTGATAAACAGAGTTTATAACTTGAATAAAGGTAT
TTATCAATGTACCATTGAGAGGGATGTAAAAAACAGCAGGGAAAATTTCAGATTCTATTATGATAAAAGGTTAATTAGAC
ATGAATATCTGAAAAGGGATTATACCACCTCTAACCGGTGA

Upstream 100 bases:

>100_bases
ATGTTTATTTTATTAATGATTATCTTAATAACCCTGTTTTACTTATTAAATTACAGGCTGATAAAGAATTTTGAATATAA
ATACTAAAGAGGTGCTCAAG

Downstream 100 bases:

>100_bases
ATTTTGCTATATTAGGATTAATTAAAGGAGATGTGATGACTTGAAAAAGTTTTTTATCATTTTATTAATGTTTGTTATAG
TAGTAATATCGCTTCTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASKVILLHNAKIGGGYVEFKITG
EDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSRENFRFYYDKRLIRHEYLKRDYTTSNR

Sequences:

>Translated_146_residues
MPKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASKVILLHNAKIGGGYVEFKITG
EDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSRENFRFYYDKRLIRHEYLKRDYTTSNR
>Mature_145_residues
PKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASKVILLHNAKIGGGYVEFKITGE
DGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSRENFRFYYDKRLIRHEYLKRDYTTSNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17642; Mature: 17511

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE
VILLHNAKIGGGYVEFKITGEDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSR
EEEEECCEECCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEHHHHCCH
ENFRFYYDKRLIRHEYLKRDYTTSNR
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKRIYKYFIFIMSLVFFVLSIYYFQMNVYEIGLKPYNNLKSDRMTGIEEFLLHVDKASK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE
VILLHNAKIGGGYVEFKITGEDGRIIDKYRLSSNKLINRVYNLNKGIYQCTIERDVKNSR
EEEEECCEECCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEEHHHHCCH
ENFRFYYDKRLIRHEYLKRDYTTSNR
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA