Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931298

Identifier: 220931298

GI number: 220931298

Start: 487287

End: 487982

Strand: Direct

Name: 220931298

Synonym: Hore_04530

Alternate gene names: NA

Gene position: 487287-487982 (Clockwise)

Preceding gene: 220931297

Following gene: 220931299

Centisome position: 18.9

GC content: 29.31

Gene sequence:

>696_bases
GTGAGCAACAATAAAAATATTAAGAAAGCCCTGTTTGAGGTTGAGAAAACGGCTTTATTTATTGTCCTTATGATTTTAAC
CATTAATTTAACGATAAATGGGTTGGTTGTGGTATTTGATGCTTCTACACCGACAGTTTATTTTAAAAGTCAATTATTTT
TTAGTATTTTTATTTCTGGTTTTGTATATTTAATAATTTATGGTATAAACAATATTATAACTTCTTTACCATTTCTGGTA
AGTTTAAATTGTCCGCGGAAAGTAGTGGCCAAAAACATAATCTTTACTGGATTGAAAAGGAGTTTTATTTTCACCCTGTT
AATTTTATTTATAAAAGTAATTGTTTTTGGAAGGGTCATTACAGATTCCTATGCAGTAAGTGCCTTTGGGATGGATTTAA
CTTCCAACACTCCTGGAGATATATTTGTCATTGCTTTGCTTTTGTATGTAGCCCTGAATTTTATAAACAGTCTGATTACC
TTGATTAGCCTGCTCGGAGTTAGATACGGATGGCAATATGCCTTATCAGTAATCTTTTTTGCCTTTGGTACCCTATTTAT
ATTTTTTAAATCAATAGTTCTTCTGGTTATTTTTGGCTGGCAGTTAAATATGTTTATTTTATTAATGATTATCTTAATAA
CCCTGTTTTACTTATTAAATTACAGGCTGATAAAGAATTTTGAATATAAATACTAA

Upstream 100 bases:

>100_bases
ACAGAGAAAGAATTATATGAATATAAAAACAGAAACATTAAGTGGAGTTCTTTGGATCTTCAGAGGTTATTTGTTAACCT
GTCAAAAGGGGGGCATATCA

Downstream 100 bases:

>100_bases
AGAGGTGCTCAAGATGCCAAAAAGAATATATAAATATTTTATTTTTATCATGTCGCTTGTTTTCTTTGTTTTAAGTATCT
ACTATTTCCAGATGAATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISGFVYLIIYGINNIITSLPFLV
SLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVITDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLIT
LISLLGVRYGWQYALSVIFFAFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY

Sequences:

>Translated_231_residues
MSNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISGFVYLIIYGINNIITSLPFLV
SLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVITDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLIT
LISLLGVRYGWQYALSVIFFAFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY
>Mature_230_residues
SNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISGFVYLIIYGINNIITSLPFLVS
LNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVITDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLITL
ISLLGVRYGWQYALSVIFFAFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26420; Mature: 26289

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCEEHHHHHHHHHHHHHH
FVYLIIYGINNIITSLPFLVSLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLITLISLLGVRYGWQYALSVIFF
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCEEHHHHHHHHHHHHHH
FVYLIIYGINNIITSLPFLVSLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLITLISLLGVRYGWQYALSVIFF
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA