| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931298
Identifier: 220931298
GI number: 220931298
Start: 487287
End: 487982
Strand: Direct
Name: 220931298
Synonym: Hore_04530
Alternate gene names: NA
Gene position: 487287-487982 (Clockwise)
Preceding gene: 220931297
Following gene: 220931299
Centisome position: 18.9
GC content: 29.31
Gene sequence:
>696_bases GTGAGCAACAATAAAAATATTAAGAAAGCCCTGTTTGAGGTTGAGAAAACGGCTTTATTTATTGTCCTTATGATTTTAAC CATTAATTTAACGATAAATGGGTTGGTTGTGGTATTTGATGCTTCTACACCGACAGTTTATTTTAAAAGTCAATTATTTT TTAGTATTTTTATTTCTGGTTTTGTATATTTAATAATTTATGGTATAAACAATATTATAACTTCTTTACCATTTCTGGTA AGTTTAAATTGTCCGCGGAAAGTAGTGGCCAAAAACATAATCTTTACTGGATTGAAAAGGAGTTTTATTTTCACCCTGTT AATTTTATTTATAAAAGTAATTGTTTTTGGAAGGGTCATTACAGATTCCTATGCAGTAAGTGCCTTTGGGATGGATTTAA CTTCCAACACTCCTGGAGATATATTTGTCATTGCTTTGCTTTTGTATGTAGCCCTGAATTTTATAAACAGTCTGATTACC TTGATTAGCCTGCTCGGAGTTAGATACGGATGGCAATATGCCTTATCAGTAATCTTTTTTGCCTTTGGTACCCTATTTAT ATTTTTTAAATCAATAGTTCTTCTGGTTATTTTTGGCTGGCAGTTAAATATGTTTATTTTATTAATGATTATCTTAATAA CCCTGTTTTACTTATTAAATTACAGGCTGATAAAGAATTTTGAATATAAATACTAA
Upstream 100 bases:
>100_bases ACAGAGAAAGAATTATATGAATATAAAAACAGAAACATTAAGTGGAGTTCTTTGGATCTTCAGAGGTTATTTGTTAACCT GTCAAAAGGGGGGCATATCA
Downstream 100 bases:
>100_bases AGAGGTGCTCAAGATGCCAAAAAGAATATATAAATATTTTATTTTTATCATGTCGCTTGTTTTCTTTGTTTTAAGTATCT ACTATTTCCAGATGAATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISGFVYLIIYGINNIITSLPFLV SLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVITDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLIT LISLLGVRYGWQYALSVIFFAFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY
Sequences:
>Translated_231_residues MSNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISGFVYLIIYGINNIITSLPFLV SLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVITDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLIT LISLLGVRYGWQYALSVIFFAFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY >Mature_230_residues SNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISGFVYLIIYGINNIITSLPFLVS LNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVITDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLITL ISLLGVRYGWQYALSVIFFAFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26420; Mature: 26289
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCEEHHHHHHHHHHHHHH FVYLIIYGINNIITSLPFLVSLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVI HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLITLISLLGVRYGWQYALSVIFF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNNKNIKKALFEVEKTALFIVLMILTINLTINGLVVVFDASTPTVYFKSQLFFSIFISG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCEEHHHHHHHHHHHHHH FVYLIIYGINNIITSLPFLVSLNCPRKVVAKNIIFTGLKRSFIFTLLILFIKVIVFGRVI HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDSYAVSAFGMDLTSNTPGDIFVIALLLYVALNFINSLITLISLLGVRYGWQYALSVIFF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGTLFIFFKSIVLLVIFGWQLNMFILLMIILITLFYLLNYRLIKNFEYKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA