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The map label for this gene is yitS [H]

Identifier: 220931282

GI number: 220931282

Start: 470161

End: 471018

Strand: Direct

Name: yitS [H]

Synonym: Hore_04370

Alternate gene names: 220931282

Gene position: 470161-471018 (Clockwise)

Preceding gene: 220931281

Following gene: 220931283

Centisome position: 18.24

GC content: 36.83

Gene sequence:

>858_bases
ATGTCAACTAAAATCATTGTTGATAGTGCCTGTGATCTTCCAGATGAAATCCTGGATAAATATGAAATTGAAGTATTGCC
CTTTAATATTCATATTGATAACCAATGTTATAAAGATGGTATTGATATAGAGGTTGAAGAGCTTTATGCTGCTATGAAAG
AGGGGAAAGTGCCTAAAACATCCCAGGTTAGTCCCGAAGATTTTAAAAGAGCTTTTAGCAGGAATGCAGAGGCAGGTAAT
GATTGTATTTATATAAGCTTTTCCGCGAAACTTTCCGGAGCCAATCAGACAGGACAGTTGGTAGCAAAAGAAATCAGGGA
TAAATATAAAGATGTTAATATAGATATTGTGGATAGCAAAGCAGGTTCAGTAGCAACCGGTATTATTGCCTATAAAGCAG
CTCTTTTGCTTGAAAAGGGAGTCAGTAGAGAAAAGGTGATAGAAAAGATTAAATACTGGGCAGATCATATTGAGCACATA
TTTATGCTCGATGATTTAAAACCCCTGGTAAGGGGTGGAAGGATTAGTAAAACTAAATTCTTTGTCGGAAACATACTTAA
TATCAAGCCTATTTTATGTGTTAAAAACGGAAAAATAGAGTTATTGAAAAAAGTCCGTGGCACCGGAAGGGCCATAAGTA
AGATGATTAATTATGTAAAAGAGAAAAGTTATGATCTAACAGAGCAACTAATAGGAATTGCCCATGCTGATGATTTAGTT
CAGGCTGAAGTGTTGAAAGAAAAGATAGAGGAGCTTGGGGGAAAAATCTTCTGTGTGGAGAAAATTGGAAGTGTGCTGGG
AGTTCATCTTGGTATCGGGGGAATTGGTGTCTTCTTTTTAAATGAGGCCGAAGCCTGA

Upstream 100 bases:

>100_bases
GATAAGGAATAAAAAAACTTATTTATGCATAGGGATTAAACAGACCCCATCTTTATTAAAATATCATATAATAAAAATTA
TAATGAGGAAGTGATTAATC

Downstream 100 bases:

>100_bases
TATATCGTAATGTAGTAGAAGCCCTGGGCCTGAGCTTAAGGAGTGTAGGGTATAAAAATAAATAACGTATATTTAGAAAC
CCTCATAGCATGGGGGTTTC

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTKIIVDSACDLPDEILDKYEIEVLPFNIHIDNQCYKDGIDIEVEELYAAMKEGKVPKTSQVSPEDFKRAFSRNAEAGN
DCIYISFSAKLSGANQTGQLVAKEIRDKYKDVNIDIVDSKAGSVATGIIAYKAALLLEKGVSREKVIEKIKYWADHIEHI
FMLDDLKPLVRGGRISKTKFFVGNILNIKPILCVKNGKIELLKKVRGTGRAISKMINYVKEKSYDLTEQLIGIAHADDLV
QAEVLKEKIEELGGKIFCVEKIGSVLGVHLGIGGIGVFFLNEAEA

Sequences:

>Translated_285_residues
MSTKIIVDSACDLPDEILDKYEIEVLPFNIHIDNQCYKDGIDIEVEELYAAMKEGKVPKTSQVSPEDFKRAFSRNAEAGN
DCIYISFSAKLSGANQTGQLVAKEIRDKYKDVNIDIVDSKAGSVATGIIAYKAALLLEKGVSREKVIEKIKYWADHIEHI
FMLDDLKPLVRGGRISKTKFFVGNILNIKPILCVKNGKIELLKKVRGTGRAISKMINYVKEKSYDLTEQLIGIAHADDLV
QAEVLKEKIEELGGKIFCVEKIGSVLGVHLGIGGIGVFFLNEAEA
>Mature_284_residues
STKIIVDSACDLPDEILDKYEIEVLPFNIHIDNQCYKDGIDIEVEELYAAMKEGKVPKTSQVSPEDFKRAFSRNAEAGND
CIYISFSAKLSGANQTGQLVAKEIRDKYKDVNIDIVDSKAGSVATGIIAYKAALLLEKGVSREKVIEKIKYWADHIEHIF
MLDDLKPLVRGGRISKTKFFVGNILNIKPILCVKNGKIELLKKVRGTGRAISKMINYVKEKSYDLTEQLIGIAHADDLVQ
AEVLKEKIEELGGKIFCVEKIGSVLGVHLGIGGIGVFFLNEAEA

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31564; Mature: 31433

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKIIVDSACDLPDEILDKYEIEVLPFNIHIDNQCYKDGIDIEVEELYAAMKEGKVPKT
CCCEEEECCCCCCCHHHHCCEEEEEEEEEEEECCHHHHCCCCEEHHHHHHHHHHCCCCCC
SQVSPEDFKRAFSRNAEAGNDCIYISFSAKLSGANQTGQLVAKEIRDKYKDVNIDIVDSK
CCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECC
AGSVATGIIAYKAALLLEKGVSREKVIEKIKYWADHIEHIFMLDDLKPLVRGGRISKTKF
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FVGNILNIKPILCVKNGKIELLKKVRGTGRAISKMINYVKEKSYDLTEQLIGIAHADDLV
EECCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QAEVLKEKIEELGGKIFCVEKIGSVLGVHLGIGGIGVFFLNEAEA
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCEEEEEEEECCCC
>Mature Secondary Structure 
STKIIVDSACDLPDEILDKYEIEVLPFNIHIDNQCYKDGIDIEVEELYAAMKEGKVPKT
CCEEEECCCCCCCHHHHCCEEEEEEEEEEEECCHHHHCCCCEEHHHHHHHHHHCCCCCC
SQVSPEDFKRAFSRNAEAGNDCIYISFSAKLSGANQTGQLVAKEIRDKYKDVNIDIVDSK
CCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECC
AGSVATGIIAYKAALLLEKGVSREKVIEKIKYWADHIEHIFMLDDLKPLVRGGRISKTKF
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
FVGNILNIKPILCVKNGKIELLKKVRGTGRAISKMINYVKEKSYDLTEQLIGIAHADDLV
EECCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QAEVLKEKIEELGGKIFCVEKIGSVLGVHLGIGGIGVFFLNEAEA
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]