Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 220931283

GI number: 220931283

Start: 471290

End: 471508

Strand: Direct

Name: uidR [C]

Synonym: Hore_04380

Alternate gene names: 220931283

Gene position: 471290-471508 (Clockwise)

Preceding gene: 220931282

Following gene: 220931284

Centisome position: 18.28

GC content: 29.68

Gene sequence:

>219_bases
ATGCCAAAAATAATTAAGGATATTGAGGAACGTATTTTTAATGCAGCCTTAAAACTTTTTGCTGAAAGAGGATATAATAA
AGTGAATATGAAAATGGTGGCAAAAGAAGCGGGTATTGCGGTTGGAACTTTATATAACTACTTTCCCAATAAACTTGGTT
TATTTTTGAGTGTGCTGGAAACAAATTTTAAAAAACCTTTGAAAAGCTTAACAAATTAA

Upstream 100 bases:

>100_bases
TGTCTAAATAGTAATGTCTAAATAAGTAGAATACTTGACAATTACTAATTCCTGTTTTATAATGAATATAAATTCATTTA
AATACCAGAAGGTGAGTTGG

Downstream 100 bases:

>100_bases
TGGAAAATCCTGATAATACAATTTATGATCTTATTGAAATTTTATATGATGAATCCAGCAAGTTAAAGGAAATGGGTAAA
GAAATTATTCGTACTAATAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MPKIIKDIEERIFNAALKLFAERGYNKVNMKMVAKEAGIAVGTLYNYFPNKLGLFLSVLETNFKKPLKSLTN

Sequences:

>Translated_72_residues
MPKIIKDIEERIFNAALKLFAERGYNKVNMKMVAKEAGIAVGTLYNYFPNKLGLFLSVLETNFKKPLKSLTN
>Mature_71_residues
PKIIKDIEERIFNAALKLFAERGYNKVNMKMVAKEAGIAVGTLYNYFPNKLGLFLSVLETNFKKPLKSLTN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8195; Mature: 8064

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIIKDIEERIFNAALKLFAERGYNKVNMKMVAKEAGIAVGTLYNYFPNKLGLFLSVLE
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
TNFKKPLKSLTN
HHHHHHHHHHCC
>Mature Secondary Structure 
PKIIKDIEERIFNAALKLFAERGYNKVNMKMVAKEAGIAVGTLYNYFPNKLGLFLSVLE
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
TNFKKPLKSLTN
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA