| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931255
Identifier: 220931255
GI number: 220931255
Start: 422377
End: 422778
Strand: Direct
Name: 220931255
Synonym: Hore_04100
Alternate gene names: NA
Gene position: 422377-422778 (Clockwise)
Preceding gene: 220931254
Following gene: 220931257
Centisome position: 16.38
GC content: 38.56
Gene sequence:
>402_bases ATGGGATTGTTATCAATATTTAATTCGCTAAAAAATAAAATAGCATGTTTTATTGGTGATAATGACTGCCGGAATCAGGA TAAAATACACCTGAACCTTGATGGTCTGTCTATATATATGGAGCGGTGTTTTGAATATGATAAACCCCATGAAGTTTCAG TGTTTGTCCCCCGGGCTGAGTTGAGGAAAAGGATAACCAGGGGGGATGAGGTTGAGGAGATCGAAATCTTATTAAATAGT ATAACAGTAGTTCACTCTCCACAGAGGCCATCTGATGAGGGAGGGGGCCCACCACCTGCTCCCCCTGAAATACCCGGGAA AAGCATAAAATTAAAGGAATTTAAAGGGATAAAAGGCAAAGAAATTAATTATTATAACAAAAAAACTAATGCTCACAGAT AG
Upstream 100 bases:
>100_bases GAATTCTAGAGTTTAACCCATAGCTGTCAGAGCTATGGGTTTTATAAATTGTATCACCATATTTAATTGTTGAATATGCT GTAACAGGGAGAGATTGAGA
Downstream 100 bases:
>100_bases TTTTTTAATGTCTAAGAAATTATACCCAGGAGTTTTTCTGTGGATAATTTATGACATCAAGAAATTTACCTTATTAATTG ATTATGGCCAAAGGCCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MGLLSIFNSLKNKIACFIGDNDCRNQDKIHLNLDGLSIYMERCFEYDKPHEVSVFVPRAELRKRITRGDEVEEIEILLNS ITVVHSPQRPSDEGGGPPPAPPEIPGKSIKLKEFKGIKGKEINYYNKKTNAHR
Sequences:
>Translated_133_residues MGLLSIFNSLKNKIACFIGDNDCRNQDKIHLNLDGLSIYMERCFEYDKPHEVSVFVPRAELRKRITRGDEVEEIEILLNS ITVVHSPQRPSDEGGGPPPAPPEIPGKSIKLKEFKGIKGKEINYYNKKTNAHR >Mature_132_residues GLLSIFNSLKNKIACFIGDNDCRNQDKIHLNLDGLSIYMERCFEYDKPHEVSVFVPRAELRKRITRGDEVEEIEILLNSI TVVHSPQRPSDEGGGPPPAPPEIPGKSIKLKEFKGIKGKEINYYNKKTNAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15105; Mature: 14973
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLSIFNSLKNKIACFIGDNDCRNQDKIHLNLDGLSIYMERCFEYDKPHEVSVFVPRAE CCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEECHHH LRKRITRGDEVEEIEILLNSITVVHSPQRPSDEGGGPPPAPPEIPGKSIKLKEFKGIKGK HHHHHCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCC EINYYNKKTNAHR CCEEECCCCCCCC >Mature Secondary Structure GLLSIFNSLKNKIACFIGDNDCRNQDKIHLNLDGLSIYMERCFEYDKPHEVSVFVPRAE CHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCEEEEECHHH LRKRITRGDEVEEIEILLNSITVVHSPQRPSDEGGGPPPAPPEIPGKSIKLKEFKGIKGK HHHHHCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCC EINYYNKKTNAHR CCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA