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The map label for this gene is 220931257

Identifier: 220931257

GI number: 220931257

Start: 424109

End: 425044

Strand: Direct

Name: 220931257

Synonym: Hore_04120

Alternate gene names: NA

Gene position: 424109-425044 (Clockwise)

Preceding gene: 220931255

Following gene: 220931258

Centisome position: 16.45

GC content: 37.71

Gene sequence:

>936_bases
ATGGAAATATTTGGTCCCATTCCTTCCAGGAGATTAGGTAAAAGCCTGGGTATAAACATCATTCCCCCGAAAGTATGTAG
TTACTCCTGTGTTTATTGTCAGGTTGGAAGGACTAAAAAAATGTGTATAAATCCCGTTGAGGTTGACGACAAGGAAGAAA
TTAAAGAAAATGTCAGACAAAAATTGGATTTACTCGAACAGCGGGGTGAAAGGGTAGATTATTTAACCTTTATAGCTGAT
GGAGAACCGACCCTTGCTTCAAATCTGGCTGAGATTATTAAATCAGTCAGGGATTTTAACATAAATACAGCCATAATAAC
CAATAGTTCAACCATAGATCGGCCCGGGGTTAAAGAAAGTTTAAAGATGGTAGACTGGGTTTCTCTGAAATGTGATGCAT
ATACAGAAGAAGTCTGGCATAAAATTAACAGGCCCCATGGTGGGTTAGAACCTGGTAAGATCAAAAATGGTATGATTGAA
TTTTCCCGGGATTATTCAGGAAAGATGGTTACCGAGACAATGCTGGTGAAGGGTATTAATGATAGTGAAGAAGAATTAAA
GTCTATTGCCTCTTTTTTAAATGAAATTAAACCTGATGTATCCTATATCAGTATTCCGACCCGTCCTCCGGCAGAGGAAT
ATGCTGTATCCCCCACCCCTGAATCAATTAACCGGGCCTATAATATTTTTAAAAGCCAGGGGTTGACACCGGAATTATTA
ATCGGATATGAAGGAAGTGGATTTGCCAGTACCGGTAATATTAAAGAAGATATTTTAAGCATTACATCAGTTCATCCCTT
AAAGCAGGAAGCTATTGTGGCTTTACTTAAAAAAGCTGACGCCAGCTGGAATGAAGTTAACTCTTTAATTGAAGAAGGTA
GGATTACTGTTGTTGAATATAATGGGAGTAAGTTTTACGTTAGAACAATAAAATAA

Upstream 100 bases:

>100_bases
GGTAATACTTTCAGACATTAATTATAGAATTATTTATTATGGAACTGGCTTATTGATAGTGATAAAAAAAATAATAGCAG
AAGAAAGGAGAATGTTATAT

Downstream 100 bases:

>100_bases
TCAGGATAATTTTAATTTTTTATGAAAAGTTACTAAATGTATTTTTTTATGTTATATATTATTTAAAATTATTTAAAATT
TTTTAAAGCCCCTGTTATGG

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MEIFGPIPSRRLGKSLGINIIPPKVCSYSCVYCQVGRTKKMCINPVEVDDKEEIKENVRQKLDLLEQRGERVDYLTFIAD
GEPTLASNLAEIIKSVRDFNINTAIITNSSTIDRPGVKESLKMVDWVSLKCDAYTEEVWHKINRPHGGLEPGKIKNGMIE
FSRDYSGKMVTETMLVKGINDSEEELKSIASFLNEIKPDVSYISIPTRPPAEEYAVSPTPESINRAYNIFKSQGLTPELL
IGYEGSGFASTGNIKEDILSITSVHPLKQEAIVALLKKADASWNEVNSLIEEGRITVVEYNGSKFYVRTIK

Sequences:

>Translated_311_residues
MEIFGPIPSRRLGKSLGINIIPPKVCSYSCVYCQVGRTKKMCINPVEVDDKEEIKENVRQKLDLLEQRGERVDYLTFIAD
GEPTLASNLAEIIKSVRDFNINTAIITNSSTIDRPGVKESLKMVDWVSLKCDAYTEEVWHKINRPHGGLEPGKIKNGMIE
FSRDYSGKMVTETMLVKGINDSEEELKSIASFLNEIKPDVSYISIPTRPPAEEYAVSPTPESINRAYNIFKSQGLTPELL
IGYEGSGFASTGNIKEDILSITSVHPLKQEAIVALLKKADASWNEVNSLIEEGRITVVEYNGSKFYVRTIK
>Mature_311_residues
MEIFGPIPSRRLGKSLGINIIPPKVCSYSCVYCQVGRTKKMCINPVEVDDKEEIKENVRQKLDLLEQRGERVDYLTFIAD
GEPTLASNLAEIIKSVRDFNINTAIITNSSTIDRPGVKESLKMVDWVSLKCDAYTEEVWHKINRPHGGLEPGKIKNGMIE
FSRDYSGKMVTETMLVKGINDSEEELKSIASFLNEIKPDVSYISIPTRPPAEEYAVSPTPESINRAYNIFKSQGLTPELL
IGYEGSGFASTGNIKEDILSITSVHPLKQEAIVALLKKADASWNEVNSLIEEGRITVVEYNGSKFYVRTIK

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34767; Mature: 34767

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFGPIPSRRLGKSLGINIIPPKVCSYSCVYCQVGRTKKMCINPVEVDDKEEIKENVRQ
CCCCCCCCCHHHHHHCCCEECCCHHHCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHH
KLDLLEQRGERVDYLTFIADGEPTLASNLAEIIKSVRDFNINTAIITNSSTIDRPGVKES
HHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHH
LKMVDWVSLKCDAYTEEVWHKINRPHGGLEPGKIKNGMIEFSRDYSGKMVTETMLVKGIN
HHHHHHHEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHCCC
DSEEELKSIASFLNEIKPDVSYISIPTRPPAEEYAVSPTPESINRAYNIFKSQGLTPELL
CCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEE
IGYEGSGFASTGNIKEDILSITSVHPLKQEAIVALLKKADASWNEVNSLIEEGRITVVEY
EEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEE
NGSKFYVRTIK
CCCEEEEEECC
>Mature Secondary Structure
MEIFGPIPSRRLGKSLGINIIPPKVCSYSCVYCQVGRTKKMCINPVEVDDKEEIKENVRQ
CCCCCCCCCHHHHHHCCCEECCCHHHCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHH
KLDLLEQRGERVDYLTFIADGEPTLASNLAEIIKSVRDFNINTAIITNSSTIDRPGVKES
HHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHH
LKMVDWVSLKCDAYTEEVWHKINRPHGGLEPGKIKNGMIEFSRDYSGKMVTETMLVKGIN
HHHHHHHEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHHHHCCC
DSEEELKSIASFLNEIKPDVSYISIPTRPPAEEYAVSPTPESINRAYNIFKSQGLTPELL
CCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEE
IGYEGSGFASTGNIKEDILSITSVHPLKQEAIVALLKKADASWNEVNSLIEEGRITVVEY
EEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEE
NGSKFYVRTIK
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]