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The map label for this gene is slyA [C]

Identifier: 220931250

GI number: 220931250

Start: 418561

End: 418986

Strand: Direct

Name: slyA [C]

Synonym: Hore_04050

Alternate gene names: 220931250

Gene position: 418561-418986 (Clockwise)

Preceding gene: 220931249

Following gene: 220931251

Centisome position: 16.23

GC content: 39.91

Gene sequence:

>426_bases
ATGGGAACACAGGATTCTTTAATTGAGGTAATTGAGAAGCTTTCTGCTATGATGGGAGAGTTTGAGGATAGAGCCCTTAA
TAGTGATGAACTGGCAGACTTAACGGTTAAGCAATTACATTATCTTGATGTTATAAAAAAATATAAAAAACCGACTTTTA
CAGACCTGGCTGAAGAAATGGGGGTAACCAAACCCACTGTAACCCTTGCGGTAAATAAATTGATAAATCAGGGTTATGTT
AAAAAAGTACAGTCTGCTGAAGACCGGAGGGTATACCACCTGTTACTGACTGAAATGGGGGAAAGGGTGGTCGACGTTCA
TGATAAAGCACACCGGGACTTTGCGCGGCAGTTTATGAAGTGCCTCAATGATGAGGAACTTAATCAGCTAGTGACCATAT
TTAAAAAGGTTGTTAAATGTGAGTAG

Upstream 100 bases:

>100_bases
TTTGTTTGACTTATATGTATTTATTAGTTATAATTAGTTAATATAAACTAACTAATGAAAATATATTAACTAATATGATA
AGCCAGGGAGGACAGTTCAA

Downstream 100 bases:

>100_bases
AAAAAAATTTATTAATATAGTTAGTTATATCAAACTAACTAATATATGCATATATTATATAAGAGTTAATATATCCACTA
TAAGGGTTAATATATCCATG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; Regulatory Protein MarR; Repressor Of Mar Operon; Regulatory Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGTQDSLIEVIEKLSAMMGEFEDRALNSDELADLTVKQLHYLDVIKKYKKPTFTDLAEEMGVTKPTVTLAVNKLINQGYV
KKVQSAEDRRVYHLLLTEMGERVVDVHDKAHRDFARQFMKCLNDEELNQLVTIFKKVVKCE

Sequences:

>Translated_141_residues
MGTQDSLIEVIEKLSAMMGEFEDRALNSDELADLTVKQLHYLDVIKKYKKPTFTDLAEEMGVTKPTVTLAVNKLINQGYV
KKVQSAEDRRVYHLLLTEMGERVVDVHDKAHRDFARQFMKCLNDEELNQLVTIFKKVVKCE
>Mature_140_residues
GTQDSLIEVIEKLSAMMGEFEDRALNSDELADLTVKQLHYLDVIKKYKKPTFTDLAEEMGVTKPTVTLAVNKLINQGYVK
KVQSAEDRRVYHLLLTEMGERVVDVHDKAHRDFARQFMKCLNDEELNQLVTIFKKVVKCE

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16262; Mature: 16131

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTQDSLIEVIEKLSAMMGEFEDRALNSDELADLTVKQLHYLDVIKKYKKPTFTDLAEEM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVTKPTVTLAVNKLINQGYVKKVQSAEDRRVYHLLLTEMGERVVDVHDKAHRDFARQFMK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLNDEELNQLVTIFKKVVKCE
HHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTQDSLIEVIEKLSAMMGEFEDRALNSDELADLTVKQLHYLDVIKKYKKPTFTDLAEEM
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVTKPTVTLAVNKLINQGYVKKVQSAEDRRVYHLLLTEMGERVVDVHDKAHRDFARQFMK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLNDEELNQLVTIFKKVVKCE
HHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA